Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00323 ATGTCTTCCTTCAAATCCTATGGCAAAGTTGACGAAGCCGAGCAAACGAGGCTTCAGGCAAAGCGAAAGACCCGAAAGAGGATCATAATCATAACCTTGTCCTCTGTAATCCTCGTTGGTGTTGTTCTTGCTGCTGTACTTGGAACCAATGCATATAATTCTCGAGACAACTCGAAAGATGGCAATGGTGATGATGTTCTTTCGGCTGCGGTTAAAGCCATTTGCAATGTGACATTGTACAAGGAGTCATGCTATAGAAGCATTGTCCCTCTTGTTCAGTCTGGGCAGATTCAGCCTGAGGAGCTGGTCAAGTTGTCAATTTATGTGGCTTTGACTGAAGTGTACAAAGCAGCTCAAAGTTTCTCTGAGAATGGAGTTTTTAAAGGGGTGACGGATAACGGGACCAAAGAAGCTTTGAGAAATTGTAGGGAGGTTCTGGGTCTAGCAGTTGATCATCTCAACAGTTCATTGTCTTCTGGGGAATCTTCTTCCATCTTTGATGTTTTTGATGATCTTCGAACATGGTTGAGTGCTGCAGGAACTTACCAGCAGACATGCATTGATGGCTTGGAGGAAATGAAAAAAGAATTGAAGAATAGTGCTGTGAATCATCTCAAAAACTCTACTGAGTTTACCAGTAACAGCCTCGCCATTATTACTTCCATTAGCATGGCTGCGAGCTCGTTGAACCTGAGGCGCTTACTGAGCTTACCCCACCATAATGAAGCACCAAAATGGCTTCATTCAGAAGACCACAGGTTACTTGGAGAGGACTTGAGGAGCAAAGCTGATATTATTGTGGCTCAAGATGGCACTGGAAAATATAGAACAATTACTGATGCACTCAAGCATGTCCCTGAGAAGAGTAACAAGAGGACTGTGATCTATGTGAAGAAAGGGATTTACTATGAAAATGTGAGAGTAGAGAAGACCAAATGGAATGTGATGATCATCGGTGATGGCATGACTACTACAATTGTTTCTGGCAGGCTTAATTTTGTTGATGGCACTCCAACATTTTCAACTGCAACTTTTGGTAATTACTTTCTCTCTCATTCTATCTCTCTGCATTTTGTACATGACAATACCGGGTTTGAACACTAA 1104 0.423 MSSFKSYGKVDEAEQTRLQAKRKTRKRIIIITLSSVILVGVVLAAVLGTNAYNSRDNSKDGNGDDVLSAAVKAICNVTLYKESCYRSIVPLVQSGQIQPEELVKLSIYVALTEVYKAAQSFSENGVFKGVTDNGTKEALRNCREVLGLAVDHLNSSLSSGESSSIFDVFDDLRTWLSAAGTYQQTCIDGLEEMKKELKNSAVNHLKNSTEFTSNSLAIITSISMAASSLNLRRLLSLPHHNEAPKWLHSEDHRLLGEDLRSKADIIVAQDGTGKYRTITDALKHVPEKSNKRTVIYVKKGIYYENVRVEKTKWNVMIIGDGMTTTIVSGRLNFVDGTPTFSTATFGNYFLSHSISLHFVHDNTGFEH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00323 367 Pfam Pectinesterase 264 355 IPR000070 GO:0030599|GO:0042545
Bach13g00323 367 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 222 IPR035513 -
Bach13g00323 367 CDD PMEI-like_3 73 223 - -
Bach13g00323 367 SMART PMEI_2 66 218 IPR006501 GO:0004857
Bach13g00323 367 Coils Coil 187 207 - -
Bach13g00323 367 Gene3D - 259 366 IPR012334 -
Bach13g00323 367 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 223 IPR035513 -
Bach13g00323 367 FunFam Pectinesterase 67 223 - -
Bach13g00323 367 Pfam Plant invertase/pectin methylesterase inhibitor 70 218 IPR006501 GO:0004857
Bach13g00323 367 PANTHER PECTINESTERASE 35 355 - -
Bach13g00323 367 NCBIfam pectinesterase inhibitor domain 66 221 IPR006501 GO:0004857
Bach13g00323 367 SUPERFAMILY Pectin lyase-like 261 346 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00323 Bach-Chr13 8045615 8047286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00323 1 356 Carbohydrate Esterase AT3G10710 46.961 5.65e-104 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00323 - - gmx:100811152 427.943