Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00322 ATGTCACCCCCACCACTTTCCCTTTTTCCCTTCCTTTGCTTCTTCTTTCTCCCATTGTTGCTTGCGCAAGCTCCTCCACCACTAACCCCACCACCACCTTCTTCCTCTGCAGCGTGCAAGTCTACATTGTACCCAAAACTATGTCGTTCCATCCTCTCCGCCATACGATCTTCGCCGTCGGATCCCTATGGCTACGGCAAGTTTTCCGTCAAACAAAGCCTCAAACAAGCCAGGAAACTGGCTAAAGTGTTTGAAGATTTCCTCAAGCGCCACCACTCTTCTTCCCTTAACCAGGCTGAGTTCGCGGCTTTGGACGACTGCGGGGAATTCAACCAGCTCAATGTTGATTACTTGGAATCTGTGTCGGAGGAGCTGAAGTCTGCCGACGGCGAGCATCAAGAGCTGGTGGAGAAAGTAGAGACTTACCTGAGCGCCGTCGCAACTAACCACTATACTTGCTATGATGGGTTGGCGGTGACCAAGAGCAACATTGCCACAGCATTATCTGTGCCATTGAGGAGTTTGTCCGAGTTGTATAGTGTATCACTTGGTTTGGTCTCTGATGCTGTGAATCGGAAACTCAGGAAAAGCAAGACCCACAAAAATGGTCTTCCCACTAAGACCTACAAATTGAGGCAGCCATTGGAGCAGCTTATTAAGTTTCTCCGAAAGAAGAACAGCTGTGACCAGTCATCCATTTGCACGAGGAGAACAGAAGGGTTACTCAAAGAAGAAAGCGCAAGCAAAGGGATTCTTTTGAATGACTTCGTGATTGTGGGACCGTATGTTACAGACAACTTCACTACCATTGGAGATGCTATTGCTGCAGCACCCAACAAGTCAAAACCAGAAGATGGGTATTTCCTTATCTATGCTAGACAAGGAGTGTACGAGGAGTATGTCATTGTTCCCAAACAGAAGAAGGGTATTTTGCTCGTTGGAGATGGTATCAATAAGACAATCATCACAGGGAACCATAGTGTGATGGATAATTTTACAACTTTCAATTCTTCCACCTTTGCTGTTGCTGGAGAAAGATTTATAGCTGTGGATCTTACATTCAAAAACACAGCCGGACCAGCAAAGCACCAAGCAGTAGCTGTGAGGAACAATGCTGATCTCTCAACATTCTACCGTTGCAGCTTTGAAGGATACCAGGACACTCTATATGTGCACTCTCTGAGGCAATTCTATAGAGAATGTGACATATATGGCACAGTGGATTTTATTTTTGGCAATGCTGCTGTGGTCTTCCAAAGCTGCAACATATATGCGCGAAAGCCATTGCCATTCCAGAAGAATGCTGTGACAGCACAAGGTAGAACAGACCCTAACCAGAACACTGGAATCTCAATCCAAAACTGCACCATTCAAGCAGCACCAGACTTGGCAATGGACTTAAACTCCACCTTGAATTACTTGGGTCGGCCATGGAAGCAGTACTCTAGGACTGTCTATATGGAATCCTATATTGGTGATCTGATTCAACCAGCTGGGTGGTTAGAATGGAATGGAACATTTGGGTTAGATACCCTTTTCTATGGTGAGTATAAAAATCATGGACCTGGTGCAAAGACTGGTCAAAGAGTAAAATGGCGTGGTTATAGTCTGTTGAATGCTACTCAAGCTTTTAACTTTACTGTCCTTAACTTTACACTGGGAAACACATGGCTGCTTGACACAGATGTACCCTTCTATGGAGGTTTAATAAAATAG 1716 0.4516 MSPPPLSLFPFLCFFFLPLLLAQAPPPLTPPPPSSSAACKSTLYPKLCRSILSAIRSSPSDPYGYGKFSVKQSLKQARKLAKVFEDFLKRHHSSSLNQAEFAALDDCGEFNQLNVDYLESVSEELKSADGEHQELVEKVETYLSAVATNHYTCYDGLAVTKSNIATALSVPLRSLSELYSVSLGLVSDAVNRKLRKSKTHKNGLPTKTYKLRQPLEQLIKFLRKKNSCDQSSICTRRTEGLLKEESASKGILLNDFVIVGPYVTDNFTTIGDAIAAAPNKSKPEDGYFLIYARQGVYEEYVIVPKQKKGILLVGDGINKTIITGNHSVMDNFTTFNSSTFAVAGERFIAVDLTFKNTAGPAKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNIYARKPLPFQKNAVTAQGRTDPNQNTGISIQNCTIQAAPDLAMDLNSTLNYLGRPWKQYSRTVYMESYIGDLIQPAGWLEWNGTFGLDTLFYGEYKNHGPGAKTGQRVKWRGYSLLNATQAFNFTVLNFTLGNTWLLDTDVPFYGGLIK 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00322 571 FunFam Pectinesterase 252 569 - -
Bach13g00322 571 NCBIfam pectinesterase inhibitor domain 11 184 IPR006501 GO:0004857
Bach13g00322 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 187 IPR035513 -
Bach13g00322 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 188 IPR035513 -
Bach13g00322 571 PANTHER PECTINESTERASE 24 558 - -
Bach13g00322 571 Gene3D - 256 571 IPR012334 -
Bach13g00322 571 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Bach13g00322 571 Pfam Plant invertase/pectin methylesterase inhibitor 37 184 IPR006501 GO:0004857
Bach13g00322 571 CDD PMEI-like_3 39 187 - -
Bach13g00322 571 Coils Coil 118 138 - -
Bach13g00322 571 SMART PMEI_2 30 185 IPR006501 GO:0004857
Bach13g00322 571 Pfam Pectinesterase 257 554 IPR000070 GO:0030599|GO:0042545
Bach13g00322 571 SUPERFAMILY Pectin lyase-like 255 567 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00322 Bach-Chr13 8038496 8043695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00322 38 570 Carbohydrate Esterase AT3G10720 64.074 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00322 K01051 - gmx:100816503 872.078