Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00318 ATGGGACAGCAAACCAGAAAGCTCTCGGATGAATACGAAGTCTCAGAGATCCTAGGAAGAGGAGGATTCTCTGTTGTGAGAAAAGGAACCAGAAAATCAAGCAGTGGAACAAAAACCCAGGTGGCCATTAAAACACTGAGAAGGTTAGGTCCCTCATCTGCTCATGGTGGTAACAAGAGCGTGGCTGCTTCCATGGGATTCCCTCTTTGGAGACAAGTTTCAGTATCAGATGCTTTGCTCACCAATGAGATTCTGGTTATGAGGAAGATAGTGGAAAATATTTCCCCTCATCCAAATGTGATTGACCTCTATGATGTCTATGAGGACTCAAATGGAGTTCATCTTGTGCTGGAGCTTTGTTCAGGTGGTGAACTCTTTGATCGGATTGTGGCCATAAATAGTTATACTGAGGAAAGGGCTGCAGCCGTGGTGAGGCAGATCGCAGAAGGTTTGGATGCTATTCATAGAGCTAATATTGTCCACAGGGACTTGAAGCCTGAGAACTGCTTGTTCCTTGACAGCAGAGAGGATGCTCCTCTCAAGATCATGGACTTTGGTTTGAGTTCTGTGGAAGAATTTACCGACCCTGTTGTGGGTTTGTTTGGATCCATTGATTATGTTTCACCAGAGGCTCTTTCTCAAGGAGAGATAACCACCAAAAGTGATATGTGGTCTCTGGGTGTAATTCTATATATCTTACTCTCTGGGTATCCACCTTTCATTGCTCAGAATAATCGCCAGAAGCAGCAAATGATAATGACTGGGAATTTCAGTTTCTATGAGAAAACTTGGAAGAGAATTTCCTCACCAGCAAAGCAATTGATTTCAAGTCTCCTAACTGTTGATCCTCACAGGAGACCTAGTGCTCAAGAGCTTCTGTGTCATCCGTGGGTGAGAGGTGACATGGCCAAAGATGATCAGATGGACCCTGAGATTGTTTCCAGATTGCAGAGTTTCAATGCTCGGCGCAAACTCCGAGCTGCTGCAATTGCCAGTGTATGGAGCACCACAATGTTCTTGAGAACCAGAAAATTGAAATCCTTGTTAGGGTCCCATGACCTCTCAGAAGAAGAAATTCAAAACCTCAGAGTACACTTCAAGAAAATATGTGCAAATGGAGACAATGCCACTCTCACTGAATTTGAGGAGGTGCTTAAAGCAATGAATATGTCATCACTTATACCTCTTGCAGCTCGTATATTTGACCTATTTGACAACAACCGTGATGGAACAGTTGACATGAGAGAGATTCTCTGTGGCTTCTCAAGCCTCAAGAACTCAAAAGGTGATGATGCTCTCCGTTTGTGCTTCCAGATGTATGACACAGATCGATCCGGTTGCATCACTAAGGAAGAAGTAGCATCTATGCTGCGAGCCTTGCCAGAAGATTGCCTTCCTGCTGATATCACTGAACCTGGTAAGCTGGATGAGATATTTGACCTAATGGATGCAAACAGTGATGGGAAGGTTACTTTTGATGAGTTCAAAGCTGCCATGCAAAGGGATAGCTCTCTGCAAGATGTGGTTCTCTCCTCTCTTAGGCCATCTTAA 1551 0.4417 MGQQTRKLSDEYEVSEILGRGGFSVVRKGTRKSSSGTKTQVAIKTLRRLGPSSAHGGNKSVAASMGFPLWRQVSVSDALLTNEILVMRKIVENISPHPNVIDLYDVYEDSNGVHLVLELCSGGELFDRIVAINSYTEERAAAVVRQIAEGLDAIHRANIVHRDLKPENCLFLDSREDAPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGEITTKSDMWSLGVILYILLSGYPPFIAQNNRQKQQMIMTGNFSFYEKTWKRISSPAKQLISSLLTVDPHRRPSAQELLCHPWVRGDMAKDDQMDPEIVSRLQSFNARRKLRAAAIASVWSTTMFLRTRKLKSLLGSHDLSEEEIQNLRVHFKKICANGDNATLTEFEEVLKAMNMSSLIPLAARIFDLFDNNRDGTVDMREILCGFSSLKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLRALPEDCLPADITEPGKLDEIFDLMDANSDGKVTFDEFKAAMQRDSSLQDVVLSSLRPS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00318 516 Gene3D - 342 509 - -
Bach13g00318 516 ProSitePatterns EF-hand calcium-binding domain. 483 495 IPR018247 -
Bach13g00318 516 Pfam Protein kinase domain 12 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00318 516 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 isoform A 3 57 - -
Bach13g00318 516 ProSiteProfiles Protein kinase domain profile. 12 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00318 516 SMART efh_1 396 424 IPR002048 GO:0005509
Bach13g00318 516 SMART efh_1 474 502 IPR002048 GO:0005509
Bach13g00318 516 SMART efh_1 432 460 IPR002048 GO:0005509
Bach13g00318 516 SMART serkin_6 12 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00318 516 CDD STKc_CAMK 12 297 - -
Bach13g00318 516 ProSitePatterns EF-hand calcium-binding domain. 441 453 IPR018247 -
Bach13g00318 516 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase 125 315 - -
Bach13g00318 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Bach13g00318 516 FunFam calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 341 510 - -
Bach13g00318 516 SUPERFAMILY Protein kinase-like (PK-like) 5 322 IPR011009 -
Bach13g00318 516 ProSitePatterns EF-hand calcium-binding domain. 405 417 IPR018247 -
Bach13g00318 516 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 475 - -
Bach13g00318 516 SUPERFAMILY EF-hand 344 506 IPR011992 -
Bach13g00318 516 Pfam EF hand 400 416 IPR002048 GO:0005509
Bach13g00318 516 ProSiteProfiles EF-hand calcium-binding domain profile. 470 505 IPR002048 GO:0005509
Bach13g00318 516 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase 66 124 - -
Bach13g00318 516 ProSitePatterns Protein kinases ATP-binding region signature. 18 44 IPR017441 GO:0005524
Bach13g00318 516 Gene3D Transferase(Phosphotransferase) domain 1 126 341 - -
Bach13g00318 516 Pfam EF-hand domain pair 431 500 IPR002048 GO:0005509
Bach13g00318 516 CDD EFh 433 500 IPR002048 GO:0005509
Bach13g00318 516 ProSiteProfiles EF-hand calcium-binding domain profile. 392 427 IPR002048 GO:0005509
Bach13g00318 516 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Bach13g00318 516 PRINTS Recoverin family signature 400 421 - -
Bach13g00318 516 PRINTS Recoverin family signature 424 443 - -
Bach13g00318 516 PRINTS Recoverin family signature 446 464 - -
Bach13g00318 516 PRINTS Recoverin family signature 354 373 - -
Bach13g00318 516 Gene3D Phosphorylase Kinase; domain 1 14 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00318 Bach-Chr13 7995376 7998526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00318 89 503 EF-hand Containing Proteins AT3G10660 37.825 8.56e-82 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Bach13g00318 Pkinase 2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00318 K13412 - gmx:732616 886.715