Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00315 ATGAAGAGGTCTATTCCTCCTCCTCCTTGTTATTCCCCTTCTTCTTCATCATCATCGACTTTCTCTGTTGTTGAGAATCCTCACCAACCGAGCCAAACAAGGCCTAAGCGTGCAAGGAGGAATCTGAAGCCTGAGAAATCAGTGAAGAACGGAGGTGATGACTCCAGCTCTGGCAGAAGGAGCTCCATTTACAGAGGAGTTACCAGGCATAGATGGACAGGGAGATATGAAGCTCATCTCTGGGACAAGACTTGCTGGAACAAAATGCAGAACAAAAAAGGAAGACAAGGTAATTTTCTTGGTGCATATGATAGTGAAGAGGCTGCAGCTCGCACCTATGATCTTGCTGCTCTCAAGTATTGGGGACCGGATACAACCTTGAATTTTCCAAAAGATGGATATACCAAGGAACTTGAGGAGATGGAAAAGGTGTCAAAGGAAGAATATTTGGCTTCTTTGAGGCGACAAAGCAGTGGGTTTTCTAGAGGGGTTTCCAAATATCGCGGTGTAGCCAGGCATCACCATAATGGCCGATGGGAAGCCAGGATTGGAAGAGTCTATGGGAACAAGTACGTTTACTTGGGTACTTTCAATACTCAAGAAGAGGCTGCTGCTGCGTATGATATTGCAGCAATAGAGTATAAAGGTATAAATGCAGTGACCAATTTTGACATAAGCAACTACATTCACATAATAATGAAGAAAAACTTGGAACCACCACAACAAAGGCAAGCCCAGAAAGTTCCCAGAATAATGAAGAGAAAAATGGACCAAAACCAAACCCAAGAAACACAAACAGATTCCAAAACAGCGAATCCAATCTACCAAACCCAAGAAACAGAGATCCAGGATTCACAAACAGTTCCAAACATTTCCTCCTCTGAATCAGAAGCAGAAAAAGCAGTACTTGAATTTCAATTTCAGTCACCCAAAACAGAGTCTACCCAGATTCCTCTTTCTGCCGAAGTTTCATCAATGGCCGTGATGGAGCCTGTGATGGAACAAGAGCTTCAATGGAGCTTTTTGGATTCTGAGCTCTCTCAATTTCAAGTCCCAGAGCTGCCTCTAGCTAAAACAGAGTCTTTTCAGGGTATAATAGATGATGCAGGGTTTGAGGAGGACATTGATTTTCTATTCCAAGGAGAACCTGAAGAAAAAGATTTCAGTTTGAAGGCAATCTTGGAAAATTCAAGCTTCGGAGACACTTTTGATGCAGCAACAAGCATGGTGGATAATGGGCAGGAAAAATTGTCTTCTGCTTCTTCTTCTTATTCTTCTTCTTTGTCTTCTTCTGCCGCTGCTTCTGCTTCTTCACCTTCTTCTTCAACAACTTCAAATTTCTTGTAA 1347 0.4254 MKRSIPPPPCYSPSSSSSSTFSVVENPHQPSQTRPKRARRNLKPEKSVKNGGDDSSSGRRSSIYRGVTRHRWTGRYEAHLWDKTCWNKMQNKKGRQGNFLGAYDSEEAAARTYDLAALKYWGPDTTLNFPKDGYTKELEEMEKVSKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVYGNKYVYLGTFNTQEEAAAAYDIAAIEYKGINAVTNFDISNYIHIIMKKNLEPPQQRQAQKVPRIMKRKMDQNQTQETQTDSKTANPIYQTQETEIQDSQTVPNISSSESEAEKAVLEFQFQSPKTESTQIPLSAEVSSMAVMEPVMEQELQWSFLDSELSQFQVPELPLAKTESFQGIIDDAGFEEDIDFLFQGEPEEKDFSLKAILENSSFGDTFDAATSMVDNGQEKLSSASSSYSSSLSSSAAASASSPSSSTTSNFL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00315 448 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 35 305 - -
Bach13g00315 448 MobiDBLite consensus disorder prediction 14 31 - -
Bach13g00315 448 FunFam AP2-like ethylene-responsive transcription factor 165 226 - -
Bach13g00315 448 CDD AP2 165 226 IPR001471 GO:0003700|GO:0006355
Bach13g00315 448 SUPERFAMILY DNA-binding domain 62 131 IPR016177 GO:0003677
Bach13g00315 448 SMART rav1_2 63 136 IPR001471 GO:0003700|GO:0006355
Bach13g00315 448 SMART rav1_2 166 230 IPR001471 GO:0003700|GO:0006355
Bach13g00315 448 SUPERFAMILY DNA-binding domain 165 226 IPR016177 GO:0003677
Bach13g00315 448 MobiDBLite consensus disorder prediction 414 448 - -
Bach13g00315 448 CDD AP2 63 130 IPR001471 GO:0003700|GO:0006355
Bach13g00315 448 ProSiteProfiles AP2/ERF domain profile. 63 130 IPR001471 GO:0003700|GO:0006355
Bach13g00315 448 Gene3D AP2/ERF domain 63 131 IPR036955 GO:0003700|GO:0006355
Bach13g00315 448 Gene3D AP2/ERF domain 165 226 IPR036955 GO:0003700|GO:0006355
Bach13g00315 448 FunFam AP2-like ethylene-responsive transcription factor 62 132 - -
Bach13g00315 448 ProSiteProfiles AP2/ERF domain profile. 166 224 IPR001471 GO:0003700|GO:0006355
Bach13g00315 448 Pfam AP2 domain 165 216 IPR001471 GO:0003700|GO:0006355
Bach13g00315 448 Pfam AP2 domain 63 122 IPR001471 GO:0003700|GO:0006355
Bach13g00315 448 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00315 Bach-Chr13 7967442 7971632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00315 44 237 AP2-EREBP Transcription Factor Family AT5G57390 65.641 1.79e-86 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bach13g00315 AP2 9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00315 - - gmx:100789774 379.793