Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00275 ATGAAGGCTGCAGAGAAGAAATTGTCGAACCCCATGAGGGAGATCAAGGTCCAGAAGCTTGTTCTCAACATCTCTGTTGGTGAGAGTGGAGATCGTCTCACCAGAGCTGCCAAGGTGCTGGAGCAGCTTAGTGGCCAAACCCCAGTATTCTCCAAAGCAAGATACACTGTTCGATCCTTTGGGATTAGAAGAAATGAAAAAATTGCATGCTATGTCACTGTTAGAGGTGACAAGGCAATGCAACTTTTGGAAAGTGGTTTGAAGGTTAAGGAATATGAACTTCTGAGAAGGAACTTCAGCGATACTGGATGTTTTGGCTTTGGTATTCAGGAGCATATTGATTTGGGAATCAAATATGATCCTTCAACTGGTATTTATGGAATGGACTTCTATGTTGTTCTGGAGCGCCCTGGTTATCGCGTGGGACGTCGCCGGAGGTGCAAGTCTCGTGTCGGCATCCAGCACCGGGTCACCAAGGAGGATGCCATGAAGTGGTTCCAAGTGAAATACGAAGGTGTGATCCTTAACAAGGCGCATGCAATTGTTGGTTAG 552 0.4638 MKAAEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAHAIVG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00275 183 ProSitePatterns Ribosomal protein L5 signature. 40 56 IPR020929 GO:0003735|GO:0005840|GO:0006412
Bach13g00275 183 Pfam ribosomal L5P family C-terminus 67 165 IPR031309 -
Bach13g00275 183 Gene3D - 1 178 IPR022803 -
Bach13g00275 183 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 4 178 IPR002132 GO:0003735|GO:0005840|GO:0006412
Bach13g00275 183 FunFam 60S ribosomal protein L11 3 175 - -
Bach13g00275 183 SUPERFAMILY RL5-like 9 174 IPR022803 -
Bach13g00275 183 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 173 IPR002132 GO:0003735|GO:0005840|GO:0006412
Bach13g00275 183 Pfam Ribosomal protein L5 10 63 IPR031310 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00275 Bach-Chr13 6984919 6987087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00275 3 183 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 93.923 4.01e-128 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00275 K02868 - mof:131144899 335.495