Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00271 ATGGAGGGAAGCCAAGTCAATGCAGATGAAAATCTTAAATCTTCTCATTCCTCATCTTCAATTGTTGCTGTAGCTATCAAGGGAAACAAGGAAAGCAATTATGTGCTAAAATGGGCACTGAGTAAGTTTGTTCCAGAGGGAAGGATTATCTTCAAGCTGATTCATATCCGAGCTGTGGGAGATGTCATTCCCCTCTCACAAGTGCGTAAAGATGTGGCAGCCGCTTTTAAAAAGGAAATGGAGTGGCAAACAAGTCAACTGCTTCTTCCTTTTGAGAAAATGTGTGATCAGAGAAAGGTTAACACAGATGTCGTAGTAATTGAATCTGATGACGTGGCAACTGCAATAGCAGAGGAAGTTGCTAAAGGTCCCTTAACCAAACTTGTCATAGGAGCTTCATCTCGTGGCTTTTTTGCAAGTAAACAAAAGGGTCTATCTGCAAAAATCTCTCTATGCACGCCCAGATTTTGCACAGTATTTGCTGTTTCAAAAGGAAAATTGTCTTCTATACGGCAAGCAGACATACAAATTGATGGAAGCATTATAGGAGATTGTAGCGAAAGCAGTTTTTCCACCAGTAGCTCATCAAACTACTCTTCCACCTCTCAAACAGACTCTGGTTCAGTTGCTTCATATGCTCCTTCACGAAATGCCTCCTTGGCACAGCAGCGATTTCAGGTTCTTTCAACTATTAATCAGACTCTTAAAAGCACAGAGTCTAGTTTAGTTGAACTTGAAACTAACCATTCTAGTCACCACTCTCTAGATCATGAGAGAGAGAATAATGCTACAAGTTCTACTGTAAAATCAGATATTGGCAATTATATGAGTCGGGTCTCTAGTTACAGAAGCGCAAAATCAGACCCCGAATCATGGATTGCAGAACAAATTGTCACCACAGATGTGCCGTTAGCAACTGAGTTTTCTACACCGAATAGACAGGATCAAACAAATTTCAACGTGGATCTGGAAAAGTTGAGGATTGAACTAAGACATGCCCAAGGATTGCATGCTGTAGCTCGAAGTGAAAACATCGATGCATCACGAAAGGTAAATGATCTAAGTAAGAGGCGATTAGAGGAATCAATGAAACTGAGGGAAACTATTGCTAAGGAGGAGAAGGCCAAAGAATTAGCAGTGATAGGGAGACAGAAATATGAAGCTGCCCAAAGAGAAGCTGATTATTTGAAAGAATGTGCTGAAAGAGAAGCTGCAAAAAGAAAAGGAGCAGAGACTCAAGCTGTACTTGCTGCCAAAGAGAAGAAAATGCTAGAGGACGCTCTTAGTGGTTCATCTACCCAGTACCGGGAGTTTGAATGGGATGAAATTGTTTCTGCTACTTCATCTTTTTCAGAGGACATGAGAATTGGAAAGGGAGCGTATGGAACAGTGTACAAGGGCAGTTTTTTTCATACAACCGTGGCCGTTAAAGTTCTCCACTCTAAAGGGAGTCATAGAAACAAGCAATTCCTGCAGGAGGTAGAAATCTTGAGTAGAATTCGTCATCCAAATGTACTTCTACTTCTTGGTGCATGTCCTGATCATGGATGCCTTGTATACGAATACATGGACAATGGTAGCTTGGATGACAGATTACTCCGAAAGAACAGTACACCTCCAATACCTTGGTTTGAGAGGTACCGAATTGCTTGTGAAGTAGCCTCAGCTCTTGCCTTTCTTCACCACTCAAAGCCAATGCTCATCATCCATCGTGATTTGAAACCAGCAAACATCTTGCTTGATCGCAACCTTGTGAGCAAGATTAGTGATGTTGGCCTTTCTACAATGCTTGATTCAGACACCTTGTCTACTATGTACAAGGACACAGGACCTGTTGGGACACTCTGCTACATAGATCCTGAGTACCAAAGGACCGGTTTAATATCTCCGAAGTCTGATGTTTATGCTTTTGGAATGGTGATCTTGCAGTTATTGACAGCAAAACCCGCAATAGCACTCACAAATATTGTAGAAACAGCGATTGAGGACGGAAATTTGACAGATATACTGGATCCAGAGGCAGGAAGTTGGCCATTTCCAGAGACACTAGACTTAGCTCGGTTGGGACTGAGCTGTGCAGAACTTAGGCGTAGAGACAGGCCAGATTTGAAAGATCATGTTATTCCTACCCTGGAGAGATTGAAGAAAGTTGTTGATAAGGCACAAGATTCTGCTTCTGCTTCAAGTGTTAAATCTAGACCTCCTAATCACTTTATCTGCCCAATACTTCAGGATATTATGGATGACCCTTGTGTTGCCGCGGATGGATACACATATGATCGTAAGGCAATTGAGACATGGTTTCAAGAGAATGACAAATCACCAATGACAAATATGGTGTTGCCTCACAAGAGCCTAATTCCTAATTACACGCTACTATTAGCAATCTTGGAGTGGAAGTCAAGACAGTGA 2412 0.4183 MEGSQVNADENLKSSHSSSSIVAVAIKGNKESNYVLKWALSKFVPEGRIIFKLIHIRAVGDVIPLSQVRKDVAAAFKKEMEWQTSQLLLPFEKMCDQRKVNTDVVVIESDDVATAIAEEVAKGPLTKLVIGASSRGFFASKQKGLSAKISLCTPRFCTVFAVSKGKLSSIRQADIQIDGSIIGDCSESSFSTSSSSNYSSTSQTDSGSVASYAPSRNASLAQQRFQVLSTINQTLKSTESSLVELETNHSSHHSLDHERENNATSSTVKSDIGNYMSRVSSYRSAKSDPESWIAEQIVTTDVPLATEFSTPNRQDQTNFNVDLEKLRIELRHAQGLHAVARSENIDASRKVNDLSKRRLEESMKLRETIAKEEKAKELAVIGRQKYEAAQREADYLKECAEREAAKRKGAETQAVLAAKEKKMLEDALSGSSTQYREFEWDEIVSATSSFSEDMRIGKGAYGTVYKGSFFHTTVAVKVLHSKGSHRNKQFLQEVEILSRIRHPNVLLLLGACPDHGCLVYEYMDNGSLDDRLLRKNSTPPIPWFERYRIACEVASALAFLHHSKPMLIIHRDLKPANILLDRNLVSKISDVGLSTMLDSDTLSTMYKDTGPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALTNIVETAIEDGNLTDILDPEAGSWPFPETLDLARLGLSCAELRRRDRPDLKDHVIPTLERLKKVVDKAQDSASASSVKSRPPNHFICPILQDIMDDPCVAADGYTYDRKAIETWFQENDKSPMTNMVLPHKSLIPNYTLLLAILEWKSRQ 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00271 803 SUPERFAMILY RING/U-box 725 802 - -
Bach13g00271 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
Bach13g00271 803 SMART serkin_6 450 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00271 803 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 22 140 - -
Bach13g00271 803 ProSitePatterns Protein kinases ATP-binding region signature. 456 477 IPR017441 GO:0005524
Bach13g00271 803 SUPERFAMILY Protein kinase-like (PK-like) 432 705 IPR011009 -
Bach13g00271 803 PANTHER OS02G0152300 PROTEIN 21 798 - -
Bach13g00271 803 MobiDBLite consensus disorder prediction 243 269 - -
Bach13g00271 803 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 734 803 IPR013083 -
Bach13g00271 803 Gene3D Transferase(Phosphotransferase) domain 1 523 733 - -
Bach13g00271 803 Pfam Protein tyrosine and serine/threonine kinase 454 652 IPR001245 GO:0004672|GO:0006468
Bach13g00271 803 Gene3D HUPs 11 141 IPR014729 -
Bach13g00271 803 ProSiteProfiles U-box domain profile. 733 803 IPR003613 GO:0004842|GO:0016567
Bach13g00271 803 CDD RING-Ubox_WDSUB1-like 735 789 - -
Bach13g00271 803 CDD STK_N 21 165 - -
Bach13g00271 803 Gene3D Phosphorylase Kinase; domain 1 428 522 - -
Bach13g00271 803 ProSiteProfiles Protein kinase domain profile. 450 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00271 803 Pfam U-box domain 735 801 IPR003613 GO:0004842|GO:0016567
Bach13g00271 803 Coils Coil 228 248 - -
Bach13g00271 803 MobiDBLite consensus disorder prediction 249 264 - -
Bach13g00271 803 SMART Ubox_2 737 799 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00271 Bach-Chr13 6942510 6947746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00271 19 801 U-box Gene Family AT4G25160 49.513 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bach13g00271 PK_Tyr_Ser-Thr 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00271 - - gsj:114409387 1097.42