Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00270 ATGGAGGGAAGCCAAGTCAATGCAGATGAAAATCTTAAATCTTCTCATTCCTCCTCTTCAATTGTTGCTGTAGCTATCAAGGGAGACAATAAAAGCAATTATGTGCTAAAATGGGCACTGAGTAAGTTTGTGCCAGAGGGAAGGATTATCATCAAGCTGATTCATATCCGAGCTGGTATAAAAGGAGTCCCAACGCCAATGGGAAATGTCATTCCCCTCTCACAAGTGCGTAACGATGTGGCAGCCGCTTTTAAAGAGGAAATGGAGTGGCAAACAAGTCAACTGCTTCTTCCTTTTAAGAAAATGTGTGATCAGAGAAAGGTTAACACAGATGTCGTAGTGATTGAATCTGATGACGTGGCAACTGCAATAGCAGAGGAAGTTGCTAAAGGTCCCTTAACCAAACTTGTCATAGGAGCTTCATCTCGTGGCTTTTTTGCAAGTAAACAAAAGGGTCTATCTGCAAAAATCTCTCTATGCACGCCCAGATTTTGCACAGTATTTGCTGTTTCAAATGGAAAATTGTCTTCTGTACGGCAAGCAGACATACAAATTGATGGAAGCATTGTAGGAGATTGTAGCGAAAGCAGTTTTTCCACCAGTAGCTCATCAAACTACACTTCCACCTCTCAAACAGACTCTGGTTCAGTTGCTTCATCTGCTCCTTCACGAAATGCCTCCTTGGCACAACAGCAATTTCAGGCTCTTTCAACTATTAATCAGACTCTTAAAAGCACAAAGTCTAGTTTGGTTGAACTTGAAACTAACCATTCTAGTCACCACTCTCTAGATCATGGGAGAGAGAATAATGCTACAATTTCTACTGTAAAATCAGATATTGGCAATTCTATGAGCCGGGTCTCTAGTTGCAGAAGCATGCAATCAGAAACCGAATCATGGATTGCAGAACAAATTGTCACCACAGATGTGCAGTTAGCAACTGAGTTTTCTACACCTAATAGACAGGATCAAACAAAGTTCAACCTGGAGCTGGAAAAGTTGAGGATTGAGCTAAGACATGCCCAAGGATTGCATGCTGTAGCTCGAAGTGAAAACATTGATGCATCACGAAAGGTAAATGATCTAAGTAAGAGGCGATTAGAGGAATCAATGAAACTGAGGGAAATTATTGCTAAGGAGGAGAAGGCCAAAGAATTAGCAGTGATAGGGAGACAGAAATATGAAGCTGCCAAAAGAGAAGCTGATTATTTGAAAGAATGTGCTGAAAGAGAAGCTGCAGAAAGAAAAGGAGCAGAGACTAAAGCTGTACTTGCTGCCAAAGAGAAGAAAATGCTAGAGGATGCTCTTACTGGTTCATCTACCCAGTACCGGGAGTTTGAATGGGATGAAATTGTTTCTGCTACTTCATCTTTTTCAGAGGACATGAGAATTGGAAAGGGAGCATATGGAACAGTGTACAAGGGCAGTTTGTTTCATACAACCGTGGCCGTTAAAGTTCTCCACTCTAAAGGGAGTCACAGAAACAAGCAATTCCTGCGGGAGGTAGAGATATTGAGTACAATCCGTCATCCAAATTTACTTCTACTTCTTGGTGCATGTCCTGATCATGGATGCCTTGTATACGAATACATGGACAATGGTAGCTTGGATGACAGATTACTCCGAAAGAACAGTACACCTCCAATACCTTGGTTTGAGAGGTACCGAATTGCTTGGGAAGTAGCCTCAGCTCTTGCCTTTCTTCACCACTCAAAGCCAATGCTCATCATCCATCGTGATTTGAAACCAGCAAACATCTTGCTTGATCGCAACTTTGTGAGCAAGATTAGTGATGTTGGCCTTTCGACAATGCTTGATTCAGACACCTTGTCTACTATGTACAAGGACACAGGACCTGTTGGGACACTCTGCTACATAGATCCTGAGTACCAAAGGACCGGGTTAATATCTCCGAAGTCTGATGTTTATGCTTTTGGAATGGTGATCTTGCAGTTATTGACAGCAAAACCTGCAATAGCACTCACACATATGGTAGAAACAGCAATTGACGATGGAAATTTGACAGATATATTGGATCCAGAGGCAGGAAGTTGGCCATTTCCAGAGACACTAGACTTAGCTCGGTTGGGACTGAGCTGTGCAGAACTTAGGCGTAGAGACAGGCCAGATTTGAAAGATCATGTTATTCCTACCCTGGAGAGATTGAAGAAAGTTGCTGATAAGGCACAAGATTCTGCTTCTGCTTCAACTTCTGCTTCAAGTGTTCAAGCTAGACCTCCTAATCACTTTATCTGCCCAATACTTCAGGATATTATGGATGATCCTTGTGTTGCCGCGGATGGATACACATATGATCGTAAGGCAATTGAGACATGGTTTCAAGAGAATAACAAATCACCAATGACAAATATGGTGTTGCCTCACAAGAGCCTAGTTCCTAATTACACGCTACTATCAGCAATCTTGGAGTGGAAGTCAAGACAGTGA 2448 0.4216 MEGSQVNADENLKSSHSSSSIVAVAIKGDNKSNYVLKWALSKFVPEGRIIIKLIHIRAGIKGVPTPMGNVIPLSQVRNDVAAAFKEEMEWQTSQLLLPFKKMCDQRKVNTDVVVIESDDVATAIAEEVAKGPLTKLVIGASSRGFFASKQKGLSAKISLCTPRFCTVFAVSNGKLSSVRQADIQIDGSIVGDCSESSFSTSSSSNYTSTSQTDSGSVASSAPSRNASLAQQQFQALSTINQTLKSTKSSLVELETNHSSHHSLDHGRENNATISTVKSDIGNSMSRVSSCRSMQSETESWIAEQIVTTDVQLATEFSTPNRQDQTKFNLELEKLRIELRHAQGLHAVARSENIDASRKVNDLSKRRLEESMKLREIIAKEEKAKELAVIGRQKYEAAKREADYLKECAEREAAERKGAETKAVLAAKEKKMLEDALTGSSTQYREFEWDEIVSATSSFSEDMRIGKGAYGTVYKGSLFHTTVAVKVLHSKGSHRNKQFLREVEILSTIRHPNLLLLLGACPDHGCLVYEYMDNGSLDDRLLRKNSTPPIPWFERYRIAWEVASALAFLHHSKPMLIIHRDLKPANILLDRNFVSKISDVGLSTMLDSDTLSTMYKDTGPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALTHMVETAIDDGNLTDILDPEAGSWPFPETLDLARLGLSCAELRRRDRPDLKDHVIPTLERLKKVADKAQDSASASTSASSVQARPPNHFICPILQDIMDDPCVAADGYTYDRKAIETWFQENNKSPMTNMVLPHKSLVPNYTLLSAILEWKSRQ 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00270 815 ProSiteProfiles Protein kinase domain profile. 458 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00270 815 CDD STK_N 21 173 - -
Bach13g00270 815 MobiDBLite consensus disorder prediction 251 270 - -
Bach13g00270 815 SUPERFAMILY Protein kinase-like (PK-like) 440 713 IPR011009 -
Bach13g00270 815 Gene3D Phosphorylase Kinase; domain 1 428 530 - -
Bach13g00270 815 Pfam Protein tyrosine and serine/threonine kinase 462 657 IPR001245 GO:0004672|GO:0006468
Bach13g00270 815 CDD RING-Ubox_WDSUB1-like 747 801 - -
Bach13g00270 815 ProSiteProfiles U-box domain profile. 745 815 IPR003613 GO:0004842|GO:0016567
Bach13g00270 815 Gene3D HUPs 11 149 IPR014729 -
Bach13g00270 815 Gene3D Transferase(Phosphotransferase) domain 1 531 744 - -
Bach13g00270 815 Pfam U-box domain 747 813 IPR003613 GO:0004842|GO:0016567
Bach13g00270 815 SMART Ubox_2 749 811 IPR003613 GO:0004842|GO:0016567
Bach13g00270 815 MobiDBLite consensus disorder prediction 199 223 - -
Bach13g00270 815 PANTHER OS02G0152300 PROTEIN 21 810 - -
Bach13g00270 815 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 23 148 - -
Bach13g00270 815 SMART serkin_6 458 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00270 815 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 745 815 IPR013083 -
Bach13g00270 815 ProSitePatterns Protein kinases ATP-binding region signature. 464 485 IPR017441 GO:0005524
Bach13g00270 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 576 588 IPR008271 GO:0004672|GO:0006468
Bach13g00270 815 SUPERFAMILY RING/U-box 735 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00270 Bach-Chr13 6918073 6923309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00270 19 813 U-box Gene Family AT4G25160 50.240 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bach13g00270 PK_Tyr_Ser-Thr 1.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00270 - - gsj:114409387 1110.52