Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00247 ATGTATATCAAAGAGATTTGCTTGGAAGGTTTCAAATCGTATGCTAATAGAACTGTTGTCTCGTGTTTTGATACTTTCTTCAATGCCATTACGGGGTTGAACGGTTCGGGCAAGTCGAACATACTCGATTCGATTTGCTTTGTGTTGGGTATCACGAATCTGCAGCAGGTTCGAGCTTCCATCCTTCAGGAGCTCGTGTATAAGCAAGGGCAAGCAGGAATTGCGAAGGCCACAGTGTCCATTATGTTTGATAATTCGGATAGGAGTAGAAGCCCATTTGGATATGAAGATCAGCCAGAGATTACAGTCACAAGACAGATTATTGTTGGAGGGAGGAACAAATATTTGATCAATGGGAAACTTGCCCAGCCTAGTCAAGTTCAAAACCTTTTTCATTCGGTGCAGCTTAACGTTAATAACCCACATTTTCTCATAATGCAAGGGCGCATTACCAAGGTTTTAAATATGAAACCACCAGAGATATTATCTATGCTGGAGGAAGCTGCAGGGACAAGAATGTATGAGTCTAAGAAAGAGAATGCTCTGAAAACACTTGAGAAGAAGCAGAATAAGGTTGATGATATCAACAGTCTTCTTGATCGGGAGATAATACCTGCTCTTGAAAAGTTAAGAAAAGAAAGGATGCAGTACATGCAATGGGCTAATAGCAATGCTGAATTAGATAGGTTGAGAAGATTCTGTATTGCTGATGAATATGTGCAAGCAGAGAGGATTAGAGACGGTGCTGTGTCTGAGTTAGAACAAGTAAAGGCCAAGATAGCTGAGATTGATAACAGTAATAAGAAGAATCAGGCAGAAGTAGAGGAAATGGAGATGAAAATAGCAAAGCTGACTGCTGAAGCATGCATTGGGGGAGAAGTGAAATCTTTGTCGGAGAAGGTGGATGCACTTGCCCAGGATCTTGTGAGGGAAACGTCTGTACTGAATAATAAAGAGGATACTCTGAGGACTGAAAAAGCCAATCAACAAAATATTGTTAGTAATATTGAAGACCTGAAGCAGTCTATAGAAGCAAAGGCCTCTTCTGTTAAAAAGGCTGAAGAGGGAGCCGTAGATCTGAAAAAGAAAGTTGATGAACTTTGTAAGAGCCTGGAGGAGCATGAAAAGGAGTACCAGGGTGTAGTAGCTGGAAAGAGTAGTGGAGATGAAGAGAAGTGCTTAGAGGATCAGCTAGCTGATGCAAAAGTTGCAGTTGGGGGTGCTGAAACAGAACTGAAACAGCTGAAGACCAGAATTAGCCACTGTGAAGAGGAACTGAAAGAGAAAAAAAATCAATTAAGGTCAAAAAGTGAGGAAGCTGTTGCTGTAGAAAATGAGCTCAATGCAAGAAGAAAAGATGTGGACAATGCCAAAATGGAATTGGAGTCTCTTCCATACAAAGAGGGCGAGATGGAAGCTTTGCAAAAGGAACGTGCTTCAGAGATGGAATGGGTGCAAAAGTGGAAGGATGAAATACGCAATCTTTCAGCTCAATTTGCAAATGTTGAATTCACATACCGTGATCCAGTCAAGAACTTTGACAGGTCAAAGGTGAAGGGCGTGGTAGCAAAACTCATCAAAGTAAAGGATAGATCTGTAATGACTGCCCTAGAGGTTACTGCTGGTGGAAAGTTGTTTAATGTTGTCGTTGACACAGAAAATACTGGAAAGCAGCTTCTGCAGAATGGTGATCTAAGAAGAAGAGTAACGATTATACCTTTGAACAAAATACAGCCTCATACTGTTCCCTCTAGGGTTCAACAAGCTGCTTCTAGATTAGTTGGCACGGAGAATGCTGAATTGGCACTTTCTTTGGTCGGCTATGATGATGAATTGGAGAGTGCTATGGAATATATATTTGGTTCAACCTTTGTTTGCAAAACCATTGATGCTGCAAAGGAGGTGGCATTTAATCGGGAAACTCGGACCCCAAGTGTCACTCTTGAAGGAGACATATTTCAACCTAGTGGTCTTCTGACTGGTGGAAGCCGGAAGGGTGGCGGTGATCTTTTAAGGCAACTTTATGCTTTGGCAGAGGCTGAGTCAAAGCTTTCAGTACATCAAAGAAGGTTGTCTGAGATTGAAGCACAGATTGAAAAGCTGCTTCCTCTTGAGAAAAGGTTCAAGGACCTCAAGACACAATTGGAACTAAAATCATATGATCTTTCATTGTTCCAGGGCAGGGCTGAGCAAAATGAACATCATAAGCTTCGTGAATTAGTAAAGAAGATAGAGCAAGAGCTTGAAGAAGTAAAATCTACAGTCAAGGAAAAACAACTTTTGTATGAAAACTGCCTCGAGTCAGTTTCAATGCTTGAGAAATCAATCAAAGAACATGACAATAATCGGGAAAGTAGGCTGAAAGCATTGGAGAAAAAAATAAAGTTAATCAAATCTCAAATGCAATCTTCTTTGAAAGATCTCAAGGGACATGATAATGAAAAGGAGAGGCTTGTAATGGAAATAGAAACTTTTATCCAGGAGCATGCATCCTTGGAAAGTCAACTAGCTTATTTGAGAACACAGATTAACGATCTTGCTTCTGCAGTAGAAGTGCAAAGATCCATGGTTGCTGCTGCAAGGGATAACCATGACCAGATTCAGTCAGAGCTAAACTCAATATGCCTGAAAATGAAAGAATGTGATAAGGAAATCAGTGACATTGTTAAGGAGAAAAATAACCTTGAACATATACTTAGCGAGAGTAATCTTGCTAGGAAGAGGATGGAAAATGAGGTAAAACAAATGGAGATGGAACAGAAAGACTGCTCTGCCAGGGTGGATAAATTGGTAGAGAAGAATGCATGGATCCCATCTGAAAAGAATTTTTTTGGTAGAAGTGGGAGTGATTATGATTTTTCTTCTCGTGATCCTTGTAAAGCAAGAGAAGAACTTGAGAAGCTTCAGGCTGAACAATCTGGGTTTGAGAAAAGGGTGAACAAGAAAGTTATGGCAATGTTTGAGAAGTCAAAGGAAGAGTATGATGCATTGATTTCCAAGAAAAACATTATTGAGGCTAACAAGATAAAAATAAAGAATGTGATTGAAGAGCTCGATGAGAAGAAGAAGGCAACATTAAGTGTTACTTGGACCAAAGTTAACAATGACTTTGGATCCATCTTTTCTACTCTATTACCGGGTGCAATGGCTAAATTAGAACCTCCCGAAGGATGTAGTTTTCTTGATGGTCTGGAGGTTCGTGTTGCATTTGGAGGTGTGTGGAAACAGTCCTTGTCAGAATTGAGTGGAGGTCAACGATCACTCCTTGCACTTTCTCTGATTCTAGCACTGCTTCTATTCAAACCTGCTCCACTTTACATCTTAGATGAGGTTGATGCGGCTCTTGACTTAAGCCACACACAGAACATAGGGAAAATGATAAAAGCTCACTTTCCACACTCCCAGTTCATCGTGGTTTCACTAAAGGAAGGCATGTTCAACAATGCAAATGTTATTTTTCGGACAAAGCTTGTGGACGGTGTTCCAACTGTTCAGAGAACTGTTGCTAAGCAGAACAAGTGA 3522 0.4055 MYIKEICLEGFKSYANRTVVSCFDTFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASILQELVYKQGQAGIAKATVSIMFDNSDRSRSPFGYEDQPEITVTRQIIVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYESKKENALKTLEKKQNKVDDINSLLDREIIPALEKLRKERMQYMQWANSNAELDRLRRFCIADEYVQAERIRDGAVSELEQVKAKIAEIDNSNKKNQAEVEEMEMKIAKLTAEACIGGEVKSLSEKVDALAQDLVRETSVLNNKEDTLRTEKANQQNIVSNIEDLKQSIEAKASSVKKAEEGAVDLKKKVDELCKSLEEHEKEYQGVVAGKSSGDEEKCLEDQLADAKVAVGGAETELKQLKTRISHCEEELKEKKNQLRSKSEEAVAVENELNARRKDVDNAKMELESLPYKEGEMEALQKERASEMEWVQKWKDEIRNLSAQFANVEFTYRDPVKNFDRSKVKGVVAKLIKVKDRSVMTALEVTAGGKLFNVVVDTENTGKQLLQNGDLRRRVTIIPLNKIQPHTVPSRVQQAASRLVGTENAELALSLVGYDDELESAMEYIFGSTFVCKTIDAAKEVAFNRETRTPSVTLEGDIFQPSGLLTGGSRKGGGDLLRQLYALAEAESKLSVHQRRLSEIEAQIEKLLPLEKRFKDLKTQLELKSYDLSLFQGRAEQNEHHKLRELVKKIEQELEEVKSTVKEKQLLYENCLESVSMLEKSIKEHDNNRESRLKALEKKIKLIKSQMQSSLKDLKGHDNEKERLVMEIETFIQEHASLESQLAYLRTQINDLASAVEVQRSMVAAARDNHDQIQSELNSICLKMKECDKEISDIVKEKNNLEHILSESNLARKRMENEVKQMEMEQKDCSARVDKLVEKNAWIPSEKNFFGRSGSDYDFSSRDPCKAREELEKLQAEQSGFEKRVNKKVMAMFEKSKEEYDALISKKNIIEANKIKIKNVIEELDEKKKATLSVTWTKVNNDFGSIFSTLLPGAMAKLEPPEGCSFLDGLEVRVAFGGVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGKMIKAHFPHSQFIVVSLKEGMFNNANVIFRTKLVDGVPTVQRTVAKQNK 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00247 1173 Coils Coil 253 287 - -
Bach13g00247 1173 SMART SMC_hinge_2 516 636 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach13g00247 1173 Coils Coil 398 460 - -
Bach13g00247 1173 SUPERFAMILY Smc hinge domain 476 683 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach13g00247 1173 Coils Coil 727 761 - -
Bach13g00247 1173 Pfam RecF/RecN/SMC N terminal domain 2 1157 IPR003395 -
Bach13g00247 1173 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Bach13g00247 1173 Coils Coil 787 807 - -
Bach13g00247 1173 FunFam Structural maintenance of chromosomes 2 1 202 - -
Bach13g00247 1173 Gene3D - 575 665 - -
Bach13g00247 1173 Gene3D - 992 1173 IPR027417 -
Bach13g00247 1173 Coils Coil 892 933 - -
Bach13g00247 1173 Pfam SMC proteins Flexible Hinge Domain 516 636 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach13g00247 1173 Coils Coil 336 377 - -
Bach13g00247 1173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1155 IPR027417 -
Bach13g00247 1173 Gene3D - 515 673 - -
Bach13g00247 1173 PIRSF SMC 1 1153 IPR024704 GO:0005524|GO:0016887
Bach13g00247 1173 Coils Coil 677 697 - -
Bach13g00247 1173 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 1 1171 - -
Bach13g00247 1173 Coils Coil 815 835 - -
Bach13g00247 1173 Coils Coil 1001 1024 - -
Bach13g00247 1173 Coils Coil 171 198 - -
Bach13g00247 1173 FunFam Structural maintenance of chromosomes 2 516 580 - -
Bach13g00247 1173 Gene3D - 1 201 IPR027417 -
Bach13g00247 1173 FunFam Structural maintenance of chromosomes 2 993 1172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00247 Bach-Chr13 6282939 6293481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00247 3 170 Structural Maintenance of Chromosomes family AT5G15920 22.619 4.92e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00247 K06674 - gmx:100788674 1837.77