Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00238 ATGGCTGATTCCAGGGATTTCTCTAGACCATCCTCTGATCTGTACCAGCCCTTAGCTGGCGTCATCAAGCGGATTCGATTGGAGAATTTCATGTGCCACAGCAACTTGGAGATTGAATTCGGAGAGTGGGTGAATTTCGTCACTGGTCAAAACGGAAGTGGTAAGAGCGCAATCCTGACTGCATTATGTGTTGCTTTTGGCTGTCGAGCTAAAGGGACTCAAAGGGCATCAACTTTGAAGGATTTCATAAAAACTGGTTGCAGTTCTGCTGCCATCCATGTGGAAATAAAAAACAATGGGGATGATGCTTTTAAGCCAGATATATATGGTGATGTCATCATTGTTGAGCGTAGGATATCTGAATCTGCAAATTCCATTGTATTGAAAGATTTCCAAGGTAAGAAGGTTGCCAGTCGGAAAACAGAACTTCAGGAAATCGTGGAACATTTTAATATTGATGTGGAGAATCCATGTATTATTATGAGTCAAGATAAAAGCAGAGAATTTTTACATTCTGGAAACGACAAAGATAAATTCAAGTTCTTTTACAAGGCCACACTTCTTCAGCAAGTCAGTGAACTTCTGGAAACTATTTCAAAAGAGCTGAAGCAGGCATCTGGATTAGTTGGTGGGTTAGAGGATACCTTAAAGCCCATAGAGAAGGAACTCCAGGAGCTGAGAGTCAAGATTAAAAATATGGAACATGTTGAACAAATTGCTCAGCAAATTCAGCAGTTAAAGAAAAAGCTTGCATGGTCATGGGTTTATAATGTGGACAAGCAACTCCAGGAACAAAGCATAAAGATTGAAAAGCTCAAGGATCGGATACCCACTTGCCAAGCTAAAATTGATCACCAAAAGGGTCTGGTTGAAGAATTGAAGGAACGCTTGAATAAGAAGAAAGCTCGAATTACAAGCATGCTGGGAAGAACGTCAGAAGTGAATGAGATGAAGGCAAAATTGGGGAAATCTATATCTTTGGCAACAAAAGAAACACTTGAACTAGAACAAGAGTGCAACCGCATAACTAGCAACATTGAAAAGATGGTACATCGTGTTAGGACTCTGGAGCAACAGATGCAAGATATTCATGAGAAGCATGAAAAAGATACTCAGGCTGAAAAATCTGAAATGGAAGAGAGACTACAGGGACTTCATAATGACGTTGAAGCTGCTCAGTTAGCTCTGAGAAGGTTAACAGAAGAGGAGGCTGTGCTCACTGAAAGTTTACAGCAGCAAAATAATGAAGTTAGAAAAATTGCTGATCAAATTGAAGAACATGAAAAAAGACGCCGTGAGAACCTTCATCATATCCACGAGCTTCAACAACACCAAACCAATAAGGTTACAGCTTTTGGAGGAGAGAGAGTGATGAATCTATTACGCATCATTGAAAGACGTCATCAGAGATTTAAGAGGCCACCTATTGGTCCAATTGGTTCTCATTTGAATTTGGTTAATGGTGATAAATGGGCGGTTGCTGTTGAACATGCAATCGGGAAGATGCTCAATTCTTTTGTAGTGACTGATCATAAGGATTCTCTACTTTTAAGAGAATGTGCAAGGGAAGCCCATTATGGTCATCTTCAAATTATAATTTATGATTTTTCTAGACCAAGATTGGTTATACCACAGCACATGCTTCCCCAAACAACAGAGGGTCCATCAGTTCTTTCCGTTTTACATTCAGAGAATGACACCATTATTAATGTTTTAGTGGATCTGGGGAGCATTGAGAGACAAGTGCTTGTAAGGGATTATGAAGCTGGAAGAGGCGTTGCTTTTGAACAAAGAATCTCAAATTTGAAGGAGGTTTACACCTCAGATGGATATAAAATGTTTTCTCGAGGCTCAGTGCAGACAGTTCTTCCCCCAAATAAGAGGCTGAGAACTGGGCGTTTATGTAGTTCTTTTGATAACGAAATTAAAAGTCTCAAACATGATGCGTCACAACAAAAGGAACTAGCTAATGACTGCAGGAGGAGTAAAAGAGAGGCAGAGATAAAGCTTGAGGATCTTGATAGGAAATTGAAACACATAAAGAGGTTGTGTTTTACCGCGGGGAAAGATTTGTCTTCTAAGAGACTAGCTTTGGAAGAAGCAAAGGACCAATATGCTGCAGAAAACCGTTTGCAACCTGCATCATCTGTTGAGGAGCTTCATCAAGAAATCTCGGAAATCCAAGAGGCAATACAGCAAAAGAAAAACTTGTTGGAAGAACATCTAGGCAGGAGGCATGAAGCAGCTGAAAAGGCAACTAATCTTAAAGTTTCATTTCAGGAACTATGTGATTCTGCACAAGGGGAGATTGATGCCTTTGAGAAAGCTGAAGGTGAACTGATGCAGATTGAACGAGATATGCGTTCAGCAGAAGAGGAGAAGATTCATTATGATGGTGTAATGACACATAAGGTCCTTCCTGACATCAAGGAGGCGGAAGTGCACCATCAGAAGTTTAAGGAGCAGAGGGAGGAAAATAAATCCCCAGCCTCTGAAATCTATAACAGATACAATAGAAACAACCAGCCACCCAAATACTAA 2541 0.4034 MADSRDFSRPSSDLYQPLAGVIKRIRLENFMCHSNLEIEFGEWVNFVTGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGCSSAAIHVEIKNNGDDAFKPDIYGDVIIVERRISESANSIVLKDFQGKKVASRKTELQEIVEHFNIDVENPCIIMSQDKSREFLHSGNDKDKFKFFYKATLLQQVSELLETISKELKQASGLVGGLEDTLKPIEKELQELRVKIKNMEHVEQIAQQIQQLKKKLAWSWVYNVDKQLQEQSIKIEKLKDRIPTCQAKIDHQKGLVEELKERLNKKKARITSMLGRTSEVNEMKAKLGKSISLATKETLELEQECNRITSNIEKMVHRVRTLEQQMQDIHEKHEKDTQAEKSEMEERLQGLHNDVEAAQLALRRLTEEEAVLTESLQQQNNEVRKIADQIEEHEKRRRENLHHIHELQQHQTNKVTAFGGERVMNLLRIIERRHQRFKRPPIGPIGSHLNLVNGDKWAVAVEHAIGKMLNSFVVTDHKDSLLLRECAREAHYGHLQIIIYDFSRPRLVIPQHMLPQTTEGPSVLSVLHSENDTIINVLVDLGSIERQVLVRDYEAGRGVAFEQRISNLKEVYTSDGYKMFSRGSVQTVLPPNKRLRTGRLCSSFDNEIKSLKHDASQQKELANDCRRSKREAEIKLEDLDRKLKHIKRLCFTAGKDLSSKRLALEEAKDQYAAENRLQPASSVEELHQEISEIQEAIQQKKNLLEEHLGRRHEAAEKATNLKVSFQELCDSAQGEIDAFEKAEGELMQIERDMRSAEEEKIHYDGVMTHKVLPDIKEAEVHHQKFKEQREENKSPASEIYNRYNRNNQPPKY 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00238 846 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 308 IPR027417 -
Bach13g00238 846 MobiDBLite consensus disorder prediction 831 846 - -
Bach13g00238 846 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 5 834 - -
Bach13g00238 846 Coils Coil 773 793 - -
Bach13g00238 846 Pfam AAA domain 24 250 IPR038729 GO:0006302|GO:0016887
Bach13g00238 846 MobiDBLite consensus disorder prediction 814 830 - -
Bach13g00238 846 Coils Coil 656 683 - -
Bach13g00238 846 Coils Coil 283 310 - -
Bach13g00238 846 SUPERFAMILY Smc hinge domain 415 615 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach13g00238 846 Coils Coil 216 236 - -
Bach13g00238 846 Coils Coil 339 366 - -
Bach13g00238 846 Coils Coil 717 744 - -
Bach13g00238 846 MobiDBLite consensus disorder prediction 814 846 - -
Bach13g00238 846 Coils Coil 368 430 - -
Bach13g00238 846 Gene3D - 21 220 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00238 19 833 Structural Maintenance of Chromosomes family AT5G61460 58.282 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00238 K22804 - qsa:O6P43_029878 1075.46