Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00237 ATGAAGCAGAGGAGGAACAACAACCCCAGAGAATGCACAATCTGCGGGAAGCCCTTTCCTAGCGGAAAAGCAATGGGGGGCCACATGCGAGCCCATTATGTGATGCATCCTCTCCCTCCGACAACCACAACCAACAAGAAAGCGGTGGAGAATTCAGCTGAATCCATCCACAATCAAGTGGGGGATAAGCTAATGCTGAATTCAAGTGCATCTAGTGAATCTAGCTCTCAGTGGAAAAGCCCAACTGGGACTAGATCCAAGCGCCGCCCAAGAGTTATGGCCGCCGAGGCGGAGCCGAAAGAAGCAGGGGAAGAACAACAAGTTAGTTCCATGGCAGATCCTGAAGTGGTTTATGCTGCAGATATTCTAGTTGATATTATCTATGAGTGGAGAAGGTACAAGAGACAGGAGTTAGAGATGTCCATGGGAAGCACAGAGCTGATAAGGGAAGAACCAAAGGTGAGTATGAACTTGGTGGAGGAGGAGAAGGAGGAGGAGGAGGAAGACAGCATTGAATGTAATGAATCTGATAAGGAAGAAGAGGTCCGGGTTCAAGCCCCTGATAAGTCTCTCGGCCTATTTCCATCCCTAATTAAGTCGTGCAAGACATGCAACACAACACTTATATCTCATGAGGCTCTTAACTTGCATAATGAAGAAGATGCCAAAGGTCGAGCTCCTGGCCTATTTCCACCCCTAAATGGGGGGATTCGCATTGAATCAAGGTCCAAAAGAGAGACATGTGACAGAACCTTAAGGTCTCATGGAACTCTTAGGTGTCACAGCGAAAGCAACAAGAAGCTGAAGGGCAAAGTGGAAGACGATGATTATGAAGATGACGACGACAGCAGTGATGGTGGCGATGGCGGCAGTGTCCAAGATGAGAAAAGACATCAATGCCCATTTTGCTTCAAAGTGTTCTCATCTGGTCAAGGGCTTGGTGGACACAAGAGAGTCCACATGGCAAATGCTGCTGCTGGTAAAGGTGACAAGCCTTCTTCTTCTGGTGGTGGTAACGGTGACAAGCCTTCTGCTCTCAAAATAAGACCAAGTTTGGATCTTAATCTGCCTGCTCCTGAGACAGATGAAGACTAG 1095 0.4785 MKQRRNNNPRECTICGKPFPSGKAMGGHMRAHYVMHPLPPTTTTNKKAVENSAESIHNQVGDKLMLNSSASSESSSQWKSPTGTRSKRRPRVMAAEAEPKEAGEEQQVSSMADPEVVYAADILVDIIYEWRRYKRQELEMSMGSTELIREEPKVSMNLVEEEKEEEEEDSIECNESDKEEEVRVQAPDKSLGLFPSLIKSCKTCNTTLISHEALNLHNEEDAKGRAPGLFPPLNGGIRIESRSKRETCDRTLRSHGTLRCHSESNKKLKGKVEDDDYEDDDDSSDGGDGGSVQDEKRHQCPFCFKVFSSGQGLGGHKRVHMANAAAGKGDKPSSSGGGNGDKPSALKIRPSLDLNLPAPETDED 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00237 364 Pfam C2H2-type zinc finger 11 32 - -
Bach13g00237 364 Pfam C2H2-type zinc finger 297 322 - -
Bach13g00237 364 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 10 363 IPR044303 GO:0006355
Bach13g00237 364 MobiDBLite consensus disorder prediction 89 103 - -
Bach13g00237 364 MobiDBLite consensus disorder prediction 266 295 - -
Bach13g00237 364 SUPERFAMILY beta-beta-alpha zinc fingers 294 322 IPR036236 -
Bach13g00237 364 MobiDBLite consensus disorder prediction 68 83 - -
Bach13g00237 364 Coils Coil 156 176 - -
Bach13g00237 364 ProSitePatterns Zinc finger C2H2 type domain signature. 300 320 IPR013087 -
Bach13g00237 364 MobiDBLite consensus disorder prediction 161 175 - -
Bach13g00237 364 SMART c2h2final6 10 32 IPR013087 -
Bach13g00237 364 SMART c2h2final6 298 320 IPR013087 -
Bach13g00237 364 MobiDBLite consensus disorder prediction 223 253 - -
Bach13g00237 364 ProSiteProfiles Zinc finger C2H2 type domain profile. 10 37 IPR013087 -
Bach13g00237 364 ProSitePatterns Zinc finger C2H2 type domain signature. 12 32 IPR013087 -
Bach13g00237 364 ProSiteProfiles Zinc finger C2H2 type domain profile. 298 325 IPR013087 -
Bach13g00237 364 SUPERFAMILY beta-beta-alpha zinc fingers 7 35 IPR036236 -
Bach13g00237 364 MobiDBLite consensus disorder prediction 309 364 - -
Bach13g00237 364 MobiDBLite consensus disorder prediction 239 253 - -
Bach13g00237 364 MobiDBLite consensus disorder prediction 68 109 - -
Bach13g00237 364 MobiDBLite consensus disorder prediction 160 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00237 Bach-Chr13 6087596 6088690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00237 242 363 C2H2 Transcription Factor Family AT2G45120 39.837 5.44e-15 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach13g00237 zf-C2H2_6 6.9e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00237 - - zju:125421441 110.538