Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00227 ATGGATTTGAAGTCGAGTCATACTCCCGTTCTCACTGATACTGCACCAATAGCAAAGTCGAGACTAGGTGTGCATTCTAGTCTGTTTCCTTATTCTGCCACAGGGGCAACTTTTCCACATGGCTTGTTACTGACAATTCCAAGAAAGAAGACGGGAATTCTTGGTGATGTTATTTCTATTGGTTGGCTGGATGCCATGAAATCATCTTCTCCTCCACCCAAGAAGATTACAAAGGATGTTAATCATGAGTTTGCATCAGCTGATGCTGATGATGCTTACAGCACCTGGCTGCTGAAGTATCCATCAGCGCTTACGTCTTTTGAGCAAATCACAAACCATGCAAAAGGCAAAAGAATAGCATTGTTTTTGGATTATGATGGAACTCTTTCACCAATTGTGGAAAACCCTGACTGTGCTTTCATGTCTGACAATATGCGTGCTGCTGTTAAAAAGGCGGCAGAATATTTCCCAACGGCAATAATTAGTGGAAGAAGCCGTGACAAGGTATATAAATTTGTAGGACTAACAGAACTCTATTATGCGGGTAGTCATGGAATGGACATCATTGGTCCTGTCAGACAATCTGTATCTGATAACCACCCTAATTGCATCAGGTCTACTGACAAGCAGGGCAAGGAAGTTAATTTATTCCAACCTGCTGCTGAGTTCTTACCGATGATTGATGAGGTGTTGACATTGCTTGTTGATCGCACAAAAGACATTGAAGGAGCAAACGTTGAGAACAATAAATTTTGTGTTTCTGTACATTACCGCAATGTAAATGAGAAGAATTGGAATACAGTGGGGCAATGTGTCCATGATATTCTGAAGGACTATCCGCGTTTACGACTAACTCATGGGCGCAAGGTTTTAGAGATCCGGCCAGTGATTGACTGGGATAAAGGGAAAGCAGTCACATTTTTACTTGAGTCACTTGGACTTAACAATTGCGAAGATGTGCTCCCTATATATGTTGGAGATGACCGGACAGATGAAGATGCATTTAAGGTTTTGAGAGAGGAAACTAGAGGTTATGGCATCCTAGTGTCTTCTATGCCCAAGGAAACCAATGCAGTTTACTCTCTTCGCGATCCATCAGAGGTCATGGAATTTCTCAAGTCACTTGTGGTATGCACTTCAAGCTCCCAAAAAGGCTTCATATAG 1164 0.421 MDLKSSHTPVLTDTAPIAKSRLGVHSSLFPYSATGATFPHGLLLTIPRKKTGILGDVISIGWLDAMKSSSPPPKKITKDVNHEFASADADDAYSTWLLKYPSALTSFEQITNHAKGKRIALFLDYDGTLSPIVENPDCAFMSDNMRAAVKKAAEYFPTAIISGRSRDKVYKFVGLTELYYAGSHGMDIIGPVRQSVSDNHPNCIRSTDKQGKEVNLFQPAAEFLPMIDEVLTLLVDRTKDIEGANVENNKFCVSVHYRNVNEKNWNTVGQCVHDILKDYPRLRLTHGRKVLEIRPVIDWDKGKAVTFLLESLGLNNCEDVLPIYVGDDRTDEDAFKVLREETRGYGILVSSMPKETNAVYSLRDPSEVMEFLKSLVVCTSSSQKGFI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00227 387 FunFam Trehalose 6-phosphate phosphatase 226 385 - -
Bach13g00227 387 CDD HAD_TPP 120 370 - -
Bach13g00227 387 Pfam Trehalose-phosphatase 122 366 IPR003337 GO:0003824|GO:0005992
Bach13g00227 387 FunFam Trehalose 6-phosphate phosphatase 119 209 - -
Bach13g00227 387 SUPERFAMILY HAD-like 120 376 IPR036412 -
Bach13g00227 387 FunFam Trehalose 6-phosphate phosphatase 220 296 - -
Bach13g00227 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 28 383 IPR044651 GO:0004805|GO:0005992
Bach13g00227 387 Gene3D - 121 362 IPR023214 -
Bach13g00227 387 NCBIfam HAD-IIB family hydrolase 121 339 IPR006379 -
Bach13g00227 387 NCBIfam trehalose-phosphatase 217 376 IPR003337 GO:0003824|GO:0005992
Bach13g00227 387 Gene3D - 202 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00227 Bach-Chr13 5934951 5937228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00227 110 383 Trehalose Biosynthesis Gene Families AT1G23870 23.390 8.37e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00227 K01087 - gmx:100775207 645.58