Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00202 ATGGCAATCATGGCAAGTCGACTATTCCTAACTTTAATTTTCATATCTTCAATCTTCTCAATAGTCTCATCAAGAAGATCACCTTCCTCCATAGATTGGTGGTGCAACGTAACCCCACACCCTGGCCCATGCAAGTACTACATGCAGCACAGCAACCACCGTTTCCGGCCAAACCACCGGTCGGAATTTCGGAAAATGCTCATTCAGTTGTCATTAGACCAAGCATTTTCCTTGCAAGAGAGTGTCCAAAGTTATGTAACAAATTGGGAGACAAGCAAGCAGAAAAATGTCTTCAACGACTGTGTGAAACTCTATGACAACACCATCTTCCATCTAAACCGAACCCTAGAAGGGCTACGCAGAAAGAGAAGCTGTTCAACCTCTGACGCACAAACATGGCTCAGCACCGCCCTCACAAACCTAGAAACCTGCAAAACCGGCGCCTTAGATCTGAGTGTTCCTGATTTCTTGGTACCTGTAATGTCTGGCAACGTTTCGGAGATGATAAGAAATAGCTTAGCCATGAATGGATTTTTCTTGAATCTTGAGAGGGCAAGGAATTTGGCAGAAGTAACAGAGGATGTGTTTCCAAGTTGGGTATCAGGGAATGAGAGGAAGCTGTTGCAGGGTTCTTCCTCCTTTAGGGCTCATCTTGTGGTGGCTAAAGATGGTTCAGGGAATTTCAAGACAGTGCAAGCTGCTATTGATGCAGCGGCAAGGAGGAGAATCAAGAGCAGATTTGTTATACATGTGAAAAAAGGAGTTTATAGAGAAAACATTGAGGTTGATAAGTACAACGATAACATCATCCTGATTGGTGATGGGATGAGAAAAACCATAATTTCTGGTGGAAGAAGCGTTCAAGATGGATTTACAACCTATAGCTCTGCAACAGCTGGCATAGATGGGCTTCACTTCATTGCCCGTGACATTACTTTCCAAAACACGGCTGGTCTTCTCAAGGGTCAAGCGGTGGCGCTCCGGTCGGCATCAGACCTCTCTGTCTTCTACCGATGTGCCATTATAGGTTACCAAGACACTCTCATGGCCCATGCACAACGTCAATTTTACAGAGAATGCAATATCTATGGCACCATAGATTTCATCTTTGGCAATGCTGCAGTTGTTTTCCAAAATTGCATAATTTATGTTAGAAAACCATTATCGGGCCAGGCGAATATGATCACAGCCCAAGGTCGAGACGACCCGTTTCAAAATTCGGGTATTTCGATCCATAACTCTCAAATCCGGGCTGCCCCGGATCTCAAGCCTGTTGTTGGAACCGTCAAAACATACCTAGGTCGGCCTTGGCAAGAATATTCAAGGGTTATGGTCATGAAAACATATATCGACAACTTGGTGAGCCCATTGGGCTGGAGCCCATGGGGAAACAGTGATTTCGCTCTGAAAACATTATATTATGGGGAGTATAAGAATTATGGGCCCGGTTCATCGACAAGGTACCGGGTACGATGGCCCGGTTTTCATGCCTTAACAAACCCAACGGAGGCTTCGCGGTTCACAGTTTCTGGCCTTCTTAGCGGACGCACATGGTTGCCAGCCACCGGCGTGCCCTTCACGTTAGGCATTTGA 1593 0.4576 MAIMASRLFLTLIFISSIFSIVSSRRSPSSIDWWCNVTPHPGPCKYYMQHSNHRFRPNHRSEFRKMLIQLSLDQAFSLQESVQSYVTNWETSKQKNVFNDCVKLYDNTIFHLNRTLEGLRRKRSCSTSDAQTWLSTALTNLETCKTGALDLSVPDFLVPVMSGNVSEMIRNSLAMNGFFLNLERARNLAEVTEDVFPSWVSGNERKLLQGSSSFRAHLVVAKDGSGNFKTVQAAIDAAARRRIKSRFVIHVKKGVYRENIEVDKYNDNIILIGDGMRKTIISGGRSVQDGFTTYSSATAGIDGLHFIARDITFQNTAGLLKGQAVALRSASDLSVFYRCAIIGYQDTLMAHAQRQFYRECNIYGTIDFIFGNAAVVFQNCIIYVRKPLSGQANMITAQGRDDPFQNSGISIHNSQIRAAPDLKPVVGTVKTYLGRPWQEYSRVMVMKTYIDNLVSPLGWSPWGNSDFALKTLYYGEYKNYGPGSSTRYRVRWPGFHALTNPTEASRFTVSGLLSGRTWLPATGVPFTLGI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00202 530 Pfam Plant invertase/pectin methylesterase inhibitor 30 175 IPR006501 GO:0004857
Bach13g00202 530 SUPERFAMILY Pectin lyase-like 214 529 IPR011050 -
Bach13g00202 530 ProSitePatterns Pectinesterase signature 2. 362 371 IPR033131 -
Bach13g00202 530 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 180 IPR035513 -
Bach13g00202 530 PANTHER PECTINESTERASE 15 520 - -
Bach13g00202 530 Gene3D - 211 530 IPR012334 -
Bach13g00202 530 FunFam Pectinesterase 211 530 - -
Bach13g00202 530 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 178 IPR035513 -
Bach13g00202 530 SMART PMEI_2 26 175 IPR006501 GO:0004857
Bach13g00202 530 Pfam Pectinesterase 218 515 IPR000070 GO:0030599|GO:0042545
Bach13g00202 530 CDD PMEI-like_3 33 176 - -
Bach13g00202 530 NCBIfam pectinesterase inhibitor domain 7 176 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00202 Bach-Chr13 5525187 5527612 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00202 34 530 Carbohydrate Esterase AT5G51490 59.722 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00202 K01051 - gmx:100807908 749.969