Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00201 ATGAAGATGCATATGAAGGTGGCCATGCTGTGTCTGATTGGTTTTGCAACCACAGCACAAACCGCAGCTCAAGCTTTACCTGGCTGCCTCAGCAAGTGCGGAGGAGTTGAAATACATTATCCATTTGGTGTTGGTACACAATCTAACACGGGCAAGGATTGTTTCTTAGACAAATGGTTCAGTCTCACCTGTGATCAAGACTTCTACTTACAGACTAATCAATCAAAAATTTCAAACATCTCTCTCCAAGGTAGTATGGACGTTCATATGCCAATCTCTCGGATTTGTTTCAACAGATCAGGTGCAGTAGTAGTCGATGAACAACCAGAACTTGGAATTCCTACTTTTACAGTTTCTAGCAAGGAAAACAAGTTCATAACCATTGGCTGCAATGCCTATGGCATTCTTCTTGGCTCTAAGAGTAATCAGAACTACGCAACTGGGTGTGTGACAATATGCAGCGGAATTCCCGATAAGCAGGATAGTGAAAGTTGCTCTGGGATTGGGTGTTGCCAGGTTGATATTCCTGTGGGAATGATGAACTTCAAAGTTGATGCGTATAGCTTTGGTAATGGAGAAGGACAAAAGAATGTGTGGGGCTTCAACAACTGCAGCTATTCTTTTGTAGCCAAAAATGGGTGGTTTAATTTCAGTGTTGATAATCTTAAGAATCTAGGGTTTAGCACGACGCCTTTGGTGATAGATTGGGCTGTTGGGAATGAGACTTGTGAAAGTGCACCAAAGTCAGCAGACTATGCTTGCAGTAGTCATAATACAGAGTGTGAAGACACTGGAACAGGATATGGGTATCTGTGTAGATGCCGAGAGGGCTATGGAGGAAACCCATACCTTCCTGAAGGTTGCCAGGATATAGATGAATGCATGGAGTCCAAGCCTTGCATTGGAGAATGCTACAACTTACCTGGGAACTACAGTTGTTCATGTCCAGAAGGATTCGAAGGAGATGGAAGACAAAATGGAACAGGTTGTGACCGCAAATCAAATAACAATACCTTGCTAGTAATTGCTTTGAGTGTAAGCTTAAGCGTCATAGCATTGCTTTTGGGAAGCTTTTATGTATATTGGGGATCGAGGAAAAGAAAGATAACCAAACTCAGAGAAAAGTTTTTTCAACAAAATGGTGGCATATTGCTTCAACAACAAATTTGTGGAAGTGGAGGATCAGCAGCAACAATGAAAATATTTACTATAGAAGATCTCAAGAAAGCCACAGACAACTTTGATGACAGAAGGATCTTAGGACAAGGGGGCAATGGAACAGTTTACAAAGGAGTGTTAGAAGACAGTAGAGTGGTAGCTATAAAGAAGTCCAAGAAATGTGACCAAAGCCAAGTTGAGCAATTCATCAATGAGGTTATTGTGCTCTCCCAAATCAACCATAGAAATGTTGTCAAGCTCCTGGGCTGTTGTTTGGAGACAGAAGTTCCTTTACTTGTTTATGAATTTATCACTAATGGAACTCTTTTCCAGCATCTTCATAATCACAGTCAATCATCCGAACTTTCATGGGCAATGCGTTTAAGAGTGGCAACCGAAACTGCAGGAGCCTTAGCATATTTACATTCTACTGCTTCTACACCAATCATACATAGAGATGTAAAGACAACAAATATACTACTAGATGATCGACTAACAGCAAAGGTTTCTGACTTTGGAGCTTCAAGACTTGTTCCTGTTGATCGAACACAAATAACAACTTTGGTCCAAGGGACATTTGGGTATCTTGACCCAGAATACTTCCACACGGGCCAATTGACAGAAAAGAGTGATGTCTACAGTTTTGGGGTTCTCTTGGCAGAGTTGTTAACAAGTAAGGTGGCAGTTTCTTTTGCTAGACAAGAGAGTTATAGGAATTTATCAGTTTACTTTCTTTCCTCGTTAAACCAGGGGAGTTTGCCTGAAATTCTGGACAATCACATAGTTAACGAAGCAAACGTTGAGCAGCTATTGGAGGTTGCAGATATTGCAAGGCGATGTTTGATGGTGGAGGGGGAGGATAGACCCACTATGAAAGAAGTGGCAAGGAAACTAGAGGGATTGAAAATTATGGAAACCTATGAAAGAAGCGGAAATAATGATATGTCCTCAGTAATGATTGAGTATTTGTCCAAACCATCTCCACCTCGCATTTCTGATATCGTAGATGGGTTAGGTAGAAGGGACAAAACAAGCTTCAAATAG 2202 0.4119 MKMHMKVAMLCLIGFATTAQTAAQALPGCLSKCGGVEIHYPFGVGTQSNTGKDCFLDKWFSLTCDQDFYLQTNQSKISNISLQGSMDVHMPISRICFNRSGAVVVDEQPELGIPTFTVSSKENKFITIGCNAYGILLGSKSNQNYATGCVTICSGIPDKQDSESCSGIGCCQVDIPVGMMNFKVDAYSFGNGEGQKNVWGFNNCSYSFVAKNGWFNFSVDNLKNLGFSTTPLVIDWAVGNETCESAPKSADYACSSHNTECEDTGTGYGYLCRCREGYGGNPYLPEGCQDIDECMESKPCIGECYNLPGNYSCSCPEGFEGDGRQNGTGCDRKSNNNTLLVIALSVSLSVIALLLGSFYVYWGSRKRKITKLREKFFQQNGGILLQQQICGSGGSAATMKIFTIEDLKKATDNFDDRRILGQGGNGTVYKGVLEDSRVVAIKKSKKCDQSQVEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFQHLHNHSQSSELSWAMRLRVATETAGALAYLHSTASTPIIHRDVKTTNILLDDRLTAKVSDFGASRLVPVDRTQITTLVQGTFGYLDPEYFHTGQLTEKSDVYSFGVLLAELLTSKVAVSFARQESYRNLSVYFLSSLNQGSLPEILDNHIVNEANVEQLLEVADIARRCLMVEGEDRPTMKEVARKLEGLKIMETYERSGNNDMSSVMIEYLSKPSPPRISDIVDGLGRRDKTSFK 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00201 733 CDD STKc_IRAK 420 687 - -
Bach13g00201 733 ProSiteProfiles EGF-like domain profile. 290 325 IPR000742 -
Bach13g00201 733 SMART egf_5 242 289 IPR000742 -
Bach13g00201 733 SMART egf_5 293 331 IPR000742 -
Bach13g00201 733 FunFam Wall-associated receptor kinase 2 490 706 - -
Bach13g00201 733 Gene3D Laminin 241 325 - -
Bach13g00201 733 Pfam Protein tyrosine and serine/threonine kinase 418 684 IPR001245 GO:0004672|GO:0006468
Bach13g00201 733 ProSiteProfiles Protein kinase domain profile. 414 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00201 733 FunFam Fibrillin 2 285 326 - -
Bach13g00201 733 Pfam Wall-associated receptor kinase galacturonan-binding 29 84 IPR025287 GO:0030247
Bach13g00201 733 ProSitePatterns Calcium-binding EGF-like domain signature. 290 313 IPR018097 GO:0005509
Bach13g00201 733 FunFam Wall-associated receptor kinase 2 384 489 - -
Bach13g00201 733 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 688 IPR045274 GO:0007166
Bach13g00201 733 SMART egfca_6 290 331 IPR001881 GO:0005509
Bach13g00201 733 CDD EGF_CA 290 322 - -
Bach13g00201 733 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Bach13g00201 733 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Bach13g00201 733 SUPERFAMILY Protein kinase-like (PK-like) 398 685 IPR011009 -
Bach13g00201 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Bach13g00201 733 SUPERFAMILY EGF/Laminin 290 324 - -
Bach13g00201 733 Gene3D Transferase(Phosphotransferase) domain 1 490 710 - -
Bach13g00201 733 Gene3D Phosphorylase Kinase; domain 1 392 489 - -
Bach13g00201 733 SMART serkin_6 414 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00201 Bach-Chr13 5505594 5511060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00201 1 692 Receptor kinase-like Gene Family AT1G21230 45.312 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bach13g00201 PK_Tyr_Ser-Thr 9.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00201 - - jre:108997248 756.133