Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00200 ATGACGATGCATATGAACACGGTAATGGTGTGGGTGATTGCTCTTGCAACTGCGGCACGAACCGCAGCTCAAGCTTTTCCTGGCTGCCTCAGCAACTGCGGAGGAGTTGAAATACATTATCCATTTGGTGTTGGTAGAATATCTAACACTGGCAAGGATTGTTTCTTGGACAAATGGTTTAATCTCACCTGTGATCATGACTCCAAATTATGGACTACTCAATCCCATAATTCTGAAACCGAATACACTCAATCTCAAATTTCAAACATTGATCTCAAAGGTAAAATGGATATATTTATGGCTATATCTCGCAATTGTTTCAATAAATCAGGTGGAGTAGTGGCTGATGAACAACCCTGGCTTGGAATACCAACTTTCACCGTTTCTGGCAAGGAAAATAAGTTCATAACCGTTGGCTGCAATACCTATGGCTATCTCAATGGCTTTGTAAATAATCGTAGATACTCAACTGGGTGCATATCACAGTGTAGTGGAATGCCCAATAAGCAAGATAGTGAAACTTGTTCTGGAATTGGGTGTTGCCAGGTTGATATTTCTACGGGAATGAGGGACTTCCAAGTTGATGCCTATAGTTTTGGATTCAATCCAAACGTGTGGGAATTCAATAACTGCAGCTATTCTTTTGTTGCCAAAAATGGTTGGTTTAATTTCAGTGTTGATCATCTTAAGAGTCTAGGGTTTAGCACGACGCCTTTGGTGATAGATTGGGCTGTAGGGAATGAGACTTGTGAAAGTGCTCACAAGTCTGAAGACTATGCTTGCAGCAGCATCAATACAGAGTGTAAGGACACAGACACTAGATATGGGTACCGCTGTAAATGCAGAGTGGGTTATGAAGGAAATCCGTACCACCCTGATGGTTGCCGAGATATAAATGAATGCAAGGTATCCACACCTTGCGTTGAAGAAGCAGAATGCCACGACCAACCTGGTAACTACAGTTGTAAATGTCGAGAAGGATTTGAAGGAGATGGCAGAGTTGATGGAAAAGGTTGTGAACGGAAATTTAATAGCAATAAATTGCTAGTAATTGCTTTGAGTGTGAGTCTAAGCGTCATAGCGTTGCTTGTAGGAAGCTTTTATGTATATTGGGGATTGAGGAAAAGGAGATTAACCAAACTTAAAGAATTTTTTTTTAAACAAAATGGTGGTATATTGTTACAACAACAAATTGGTGCTAGTGGAGGGTTAACTGCAACAATGAAAATCTTTACTTTGGAAGATCTCAAGAAAGCTACTAACAACTTTGATGAAAGAAGGATCTTAGGCCAAGGGGGGCATGGAACAGTTTATAAAGGAGTATTAGAAGACAGTAGAGTGGTAGCCATAAAGAAGTCCAAGATTTGTGATCAAAGCCAAGTTGACCAATTCATCAATGAGGTTGTTGTGCTCTCCCAAATCAATCATAGAAATGTTGTCAAGCTCTTTGGTTGTTGTCTAGAGACAGAAGTTCCCCTGCTTGTTTATGAATTTATCACTAATGGGACTCTTTCTAAGCATCTTCATAATCAAGGTCAGTCATCTCAACTTTCATGGACAATGCGCTTAAGAGTAGCAGCAGAAACTGCAGGAGCCTTAGCATACTTACACTCTGCTGCCTCAACACCAATCATACATAGAGATGTAAAGACAGCAAATATATTACTAGATGACAGATTCACAGCAAAAGTTTCTGATTTTGGAGCTTCAAGACTTGTCCCAATTGACCAGAGCCAAATAACAACTTTGGTACAAGGAACATTCGGATACCTTGACCCCGAATACTTCCACACAGGCCAATTAACAGAAAAGAGTGATGTCTATAGTTTTGGAGTTGTCTTGGCAGAGTTATTAACAAGCAAGAAGGCAGTTTCTTTTGATCGACCAGAAGAATATAGAAATCTATCAGTTTACTTCGTTTCTTCACTAAACCAGGATCAACTTCCTCAAATTGTGGACAGTCACATATTTAACGGAGAAAACTTTGAGCAGCTGGTGGAAGTTGCAAATATTGCAGGGCGGTGTTTAATGGTGAAGGGGGAGGATAGACCCACTATGAAAGAAGTGGCATTGGAGCTAGAGGGATTAACAATTCTAGAAAGACACCCATGGAGATGTGGTGATAATGACATGTCTTCAGAGGAGACTGAGAATTTGTGTTAG 2163 0.4027 MTMHMNTVMVWVIALATAARTAAQAFPGCLSNCGGVEIHYPFGVGRISNTGKDCFLDKWFNLTCDHDSKLWTTQSHNSETEYTQSQISNIDLKGKMDIFMAISRNCFNKSGGVVADEQPWLGIPTFTVSGKENKFITVGCNTYGYLNGFVNNRRYSTGCISQCSGMPNKQDSETCSGIGCCQVDISTGMRDFQVDAYSFGFNPNVWEFNNCSYSFVAKNGWFNFSVDHLKSLGFSTTPLVIDWAVGNETCESAHKSEDYACSSINTECKDTDTRYGYRCKCRVGYEGNPYHPDGCRDINECKVSTPCVEEAECHDQPGNYSCKCREGFEGDGRVDGKGCERKFNSNKLLVIALSVSLSVIALLVGSFYVYWGLRKRRLTKLKEFFFKQNGGILLQQQIGASGGLTATMKIFTLEDLKKATNNFDERRILGQGGHGTVYKGVLEDSRVVAIKKSKICDQSQVDQFINEVVVLSQINHRNVVKLFGCCLETEVPLLVYEFITNGTLSKHLHNQGQSSQLSWTMRLRVAAETAGALAYLHSAASTPIIHRDVKTANILLDDRFTAKVSDFGASRLVPIDQSQITTLVQGTFGYLDPEYFHTGQLTEKSDVYSFGVVLAELLTSKKAVSFDRPEEYRNLSVYFVSSLNQDQLPQIVDSHIFNGENFEQLVEVANIAGRCLMVKGEDRPTMKEVALELEGLTILERHPWRCGDNDMSSEETENLC 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00200 720 SMART serkin_6 423 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00200 720 ProSiteProfiles Protein kinase domain profile. 423 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00200 720 Pfam Protein tyrosine and serine/threonine kinase 426 691 IPR001245 GO:0004672|GO:0006468
Bach13g00200 720 SUPERFAMILY Protein kinase-like (PK-like) 406 693 IPR011009 -
Bach13g00200 720 FunFam Fibrillin 2 292 335 - -
Bach13g00200 720 FunFam Wall-associated receptor kinase 2 499 717 - -
Bach13g00200 720 Gene3D Phosphorylase Kinase; domain 1 394 498 - -
Bach13g00200 720 CDD STKc_IRAK 429 696 - -
Bach13g00200 720 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 697 IPR045274 GO:0007166
Bach13g00200 720 Pfam Wall-associated receptor kinase galacturonan-binding 29 93 IPR025287 GO:0030247
Bach13g00200 720 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 313 324 IPR000152 -
Bach13g00200 720 Gene3D Plasmodium vivax P25 domain 234 346 - -
Bach13g00200 720 CDD EGF_CA 297 331 - -
Bach13g00200 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Bach13g00200 720 ProSiteProfiles EGF-like domain profile. 297 340 IPR000742 -
Bach13g00200 720 FunFam Wall-associated receptor kinase 2 393 498 - -
Bach13g00200 720 Gene3D Transferase(Phosphotransferase) domain 1 499 705 - -
Bach13g00200 720 SMART egfca_6 297 340 IPR001881 GO:0005509
Bach13g00200 720 Pfam EGF domain 304 333 IPR024731 -
Bach13g00200 720 ProSitePatterns Protein kinases ATP-binding region signature. 429 452 IPR017441 GO:0005524
Bach13g00200 720 ProSitePatterns Calcium-binding EGF-like domain signature. 297 322 IPR018097 GO:0005509
Bach13g00200 720 SUPERFAMILY EGF/Laminin 297 332 - -
Bach13g00200 720 SMART egf_5 249 296 IPR000742 -
Bach13g00200 720 SMART egf_5 300 340 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00200 Bach-Chr13 5469374 5473548 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00200 1 719 Receptor kinase-like Gene Family AT1G21230 43.502 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bach13g00200 PK_Tyr_Ser-Thr 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00200 - - jre:108997248 775.778