Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00198 ATGAAGATGCATATGAAGGTGGCCATGCTGTGTCTGATTGGTTTTGCAACCGCAGCACAAACCGCAGCTCAAGCTTTACCTGGCTGCCTCAGCAACTGTGGAGGAGTTGAAATACATTATCCATTTGGTGTTGGTACGCAATCTAACACGGGCAAGGATTGTTTCTTAGACAAATGGTTCAATCTCACCTGTGATGGCTTCAAATTATGGACTACTCAATCCCATAATTCTCCAACCGAAAACAATCAATCCCAAATTGAAAACATTGATCTCAAAGGTAAAATGGATATACTTATGCCTATATCTCGCATTTGTTTCAATGAATCAGGTGTAGCAGTGGCTGATGAACAACCCAGGCTTGGAATACCAACTTTCACCGTTTCTGGGAAGGAAAATAAGTTCATAACCGTTGGCTGCAATACCTATGGCTATCTCAATGGCATTGTAAATAATCTGAGCTACTCAACTGGGTGCATATCAAAGTGTAGTCGAATGCTCAATGAGCACGATAGTGACACTTGTTCTGGAATTGGGTGTTGCCAGGTTGATATTTCTACGGGAATGAGGGATTTCCAAGTTGATGCCTATAGTTTTGAATTCAATCGAAAAGTGTGGGTATTCAACAACTGCAGCTATTCTTTTGTTGCCAGAAATGGTTGGTTTAACTTCAGTGTTGATCATCTTAAGAGTCTAGGGTTTAGCACGACGCCTTTGGTGATAGATTGGGCTGTTGGGAATAGGACTTGTGAAAGTGCTCACAAGTCTGAAGACTATGCTTGCAGCAGCATCAATACAGAGTGTGAGGACACAGACACTAGATATGGGTACCGCTGTCAATGCAGAAAGGGTTATGAAGGAAATCCGTACCTCCCTGACGGTTGCCCAGATGATATAAATGAATGCAAGATATCCAAACCTTGCGTTGAAGAAGCAGAATGCGACAACCAACCTGGTAACTACAGATGTACATGTCGAGAAGGATTTGAAGGAGATGGGAGAGTTGATGGAAAAGGTTGTGAACGCAAATTTAATAGCCATTCATCACTAGTAATTGCTTTGAGTGTGAGTGTATGCGTCATAGCATTGCTTGTAGTAAGCTTTTGTGTATATTGGGGATTGAGGAAAAGAAGATTAACCAAACTTACAGAAAAGTTTTTTCAACAAAATGGTGGTATATTGTTACAACAACAAATTGGTGCTAGTGGAGGGTCAGCTGCAACAATGAAAATCTTGACTTTGGAAGATCTCAAGAAAGCTACTAACAACTTTGATGAAAGAAGGATCTTAGGCCAAGGGGGGCATGGAACAGTTTATAAAGGAGTATTAGAAGACAGTAGAGTGGTAGCCATAAAGAAGTCCAAGATTTGTGACCAAAGCCAAGTTGAACAATTCATCAATGAGGTTGTTGTGCTTACCCAAATCAACCATAGAAATGTTGTCAAGATCTTTGGTTGTTGTCTAGAGACGGAAGTTCCCCTGCTTGTTTATGAATTTATCACTAATGGGACGCTTTCTGAGCATCTTCATAATCAAGGTCAATCATCTCAACTTTCATGGATAATGCGCTTAAGAGTAGCAGCAGAAACTGCAGGAGCCTTAGCATACTTACACTCTGCTGCCTCAACACCAATCATACATAGAGATGTAAAGACAGCAAATATACTACTAGATGACAGACTCACAGCAAAAGTTTCTGACTTTGGAGCTTCAAGACTTGTCCCAATTGACCAGACCCAAATAACAACTTTGGTACAAGGAACATTCGGATACCTTGACCCAGAATACTTCCACACAGGCCAATTAACAGAAAAGAGTGATGTCTATAGTTTTGGAGTTGTCTTGGCAGAGTTATTAACAAGCAAGAAGGCACTTTCTTTTGATAGGCCAGAGGAAGATAGAAACCTAGCAGTTTACTTCGTTTCTTCGTTAAACAAGGGTCAGCTGCCTGAAATTTTGGACAATTACATAATTAACGAAGCAAACTTTGAGCAGTTGATGGAAGTTGCAAATATTGTAAGGCGGTGTTTAATGGTGAAGGGAGAGGATAGACCCACAATGAAAGAAGTGGCAATGGAGCTTGAGGGATTAAGAATTCCTGAAAAGCTCCCATGTGGATGGGGAGAAAATGACGTGTCTTCAGAAGAGACCGAGTATTTGCTGAAATCAACTCCACCATCTCACATTGTTGATGTTGGAGATGGTTTAGTTGGTAGCAGTAAAACAATGATCTAG 2232 0.4086 MKMHMKVAMLCLIGFATAAQTAAQALPGCLSNCGGVEIHYPFGVGTQSNTGKDCFLDKWFNLTCDGFKLWTTQSHNSPTENNQSQIENIDLKGKMDILMPISRICFNESGVAVADEQPRLGIPTFTVSGKENKFITVGCNTYGYLNGIVNNLSYSTGCISKCSRMLNEHDSDTCSGIGCCQVDISTGMRDFQVDAYSFEFNRKVWVFNNCSYSFVARNGWFNFSVDHLKSLGFSTTPLVIDWAVGNRTCESAHKSEDYACSSINTECEDTDTRYGYRCQCRKGYEGNPYLPDGCPDDINECKISKPCVEEAECDNQPGNYRCTCREGFEGDGRVDGKGCERKFNSHSSLVIALSVSVCVIALLVVSFCVYWGLRKRRLTKLTEKFFQQNGGILLQQQIGASGGSAATMKILTLEDLKKATNNFDERRILGQGGHGTVYKGVLEDSRVVAIKKSKICDQSQVEQFINEVVVLTQINHRNVVKIFGCCLETEVPLLVYEFITNGTLSEHLHNQGQSSQLSWIMRLRVAAETAGALAYLHSAASTPIIHRDVKTANILLDDRLTAKVSDFGASRLVPIDQTQITTLVQGTFGYLDPEYFHTGQLTEKSDVYSFGVVLAELLTSKKALSFDRPEEDRNLAVYFVSSLNKGQLPEILDNYIINEANFEQLMEVANIVRRCLMVKGEDRPTMKEVAMELEGLRIPEKLPCGWGENDVSSEETEYLLKSTPPSHIVDVGDGLVGSSKTMI 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00198 743 ProSiteProfiles Protein kinase domain profile. 423 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00198 743 SMART egf_5 300 340 IPR000742 -
Bach13g00198 743 SMART egf_5 248 295 IPR000742 -
Bach13g00198 743 FunFam Fibrillin 2 292 335 - -
Bach13g00198 743 CDD STKc_IRAK 429 696 - -
Bach13g00198 743 SUPERFAMILY Protein kinase-like (PK-like) 407 694 IPR011009 -
Bach13g00198 743 Pfam Protein tyrosine and serine/threonine kinase 426 693 IPR001245 GO:0004672|GO:0006468
Bach13g00198 743 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 313 324 IPR000152 -
Bach13g00198 743 Pfam EGF domain 305 333 IPR024731 -
Bach13g00198 743 CDD EGF_CA 297 331 - -
Bach13g00198 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Bach13g00198 743 Gene3D Transferase(Phosphotransferase) domain 1 499 702 - -
Bach13g00198 743 Gene3D Laminin 246 336 - -
Bach13g00198 743 ProSiteProfiles EGF-like domain profile. 297 340 IPR000742 -
Bach13g00198 743 Gene3D Phosphorylase Kinase; domain 1 394 498 - -
Bach13g00198 743 SUPERFAMILY EGF/Laminin 297 332 - -
Bach13g00198 743 FunFam Wall-associated receptor kinase 2 499 716 - -
Bach13g00198 743 SMART serkin_6 423 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00198 743 SMART egfca_6 297 340 IPR001881 GO:0005509
Bach13g00198 743 ProSitePatterns Protein kinases ATP-binding region signature. 429 452 IPR017441 GO:0005524
Bach13g00198 743 ProSitePatterns Calcium-binding EGF-like domain signature. 297 322 IPR018097 GO:0005509
Bach13g00198 743 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 704 IPR045274 GO:0007166
Bach13g00198 743 Pfam Wall-associated receptor kinase galacturonan-binding 29 93 IPR025287 GO:0030247
Bach13g00198 743 FunFam Wall-associated receptor kinase 2 393 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00198 Bach-Chr13 5427005 5431162 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00198 1 720 Receptor kinase-like Gene Family AT1G21230 44.414 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bach13g00198 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00198 - - jre:108997248 771.155