Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00196 ATGGTGCTGAACAGGACGATGCATATGAAAACGGCAATGGTATGGGTGATTGCTCTTGCAACTGCAGCACGAACCGCAGCTCAAGCTTTTCCCGGCTGCCTCAGCATCTGCGGAGGAGTTAAAATACATTATCCATTTGGTGTTGGTACGCAATCTGACACGGGCAAGGATTGTTTCTTAGACAAATTGTTCAGTCTCACCTGTGATCATGATTCCAAATTATGGACTACTCAATCACATAATTCACAAACCGAATACACTCAATCCCAAATTGAAAGCATTGATCTCAAAGGTAAAATGGATATACTTATGCCTATATCTCGCATTTGTTTCAATGAATCAGGTGTGGCAGTGGCTGATGAACAACCCTGGCTTGGAATACCAACTTTCACCGTTTCTGACAAGGAAAATAAGTTCATAACCGTTGGATGCAATACCTATGGCTATCTCAATGGCTTTGTAAATAATCTGAACTACTCTACTGGGTGCCTATCAAAGTGTAGTCGAATGCTCAATGAGCAAGATAGTAAAACTTGTTCTGGAATTGGGTGTTGCCAGGTTGATATTTCTATGAGAATGAGGGACTTCCAAGTTGATGCCTATAGTTTTGACTTCAATCGAAACGTGTGGGTATTCAACAACTGCAGCTATTCTTTTGTTGCCAAAAATGGTTGGTTTAATTTCAGTGTTGATCATCTTACGAGTCTACCGTTTAGCGCGACGCCTTTGGTGATAGATTGGGCTGTTGGGAATGAGACTTGTGAAAGTGCTTACAAGTCTGAAGACTATGTTTGCAGCAGCAATCATACAGAGTGTGAGGACACAGACACTAGAGATGGGTACCGTTGTAAATGCAGAGAGGGTTATGAAGGAAATCCGTACCACCCTGATGGTTGCCAAGATATAAATGAATGCAAGGTATCCAAACCTTGCGTTGAAGAAGCAGAATGCCACGAAGAACCTGGTAACTACAGTTGTACATGTCGAGAAGGATTTGAAGGAGATGGGAGAGTTGGTGGAAAAGGTTGTGAACGCAAATTTAATAGCAATACATCGCTAGTAATTGCTTTGAGTGTGAGTATAAGCGTAATAGCATTGCTTGTAGGAAGCTTTTATGTATATTGGGGATTGAGGAAAAGGAGATTAACCAAACTTAAAGAAATTTTTTTTCAACAAAATGGTGGTATATTGTTACAACAACAAATTGGTGCTAGTGGAGGGTCAGCTGCAGCAATGAAAATCTTTACTTTGGAAGATCTCAAGAAAGCTACTAACAACTTTGATGAAAGAAGGATCTTAGGCCAAGGGGGGCATGGAACAGTTTATAAAGGAGTATTAGAAGACAGTACACTGGTAGCCATAAAGAAGTCCAAGATTTGTGACCAAAGCCAAGTTGAACAATTCATCAATGAGGTTGTTGTGCTTACCCAAATCAACCATAGAAATGTTGTAAAGCTCTTTGGTTGTTGTCTAGAGACAGAAGTTCCCCTGCTTGTTTATGAGTTTATCACTAATGGGACTCTTTCTGAGCATCTTCATAATCAAGGTCAATCATCTCAACTTTCATGGACAATGCGCTTAAGAGTAGCAGCAGAAACTGCAGGAGCCTTAGCATACTTACACTCTGCTGCCTCAACACCAATCATACATAGAGATGTAAAGACAGCAAATATACTACTAGATGACAGACTCACAGCAAAAGTTTCTGACTTTGGAGCTTCAAGACTTGTCCCAATCGACCAGACCCAAATAACAACTTTGGTACAAGGAACATTCGGATACCTTGACCCGGAATACTTCCACACAAGCCAATTAACAGAAAAGAGTGATGTCTATAGTTTTGGAGTTGTCTTGGCAGAGTTATTAACGAGCAAGAAGGCACTTTCTTTTGATAGGCCAGAGGAAGATAGAAACCTAGCAGTTTACTTCCTTTCTTCGTTAAACAAGGGTCAGCTGCCTGAAATTTTGGACAATTACATAATTAACGAAGCAAACTTTGAGCAGTTGATGGAAGTTGCAAATATTGCAAGGCGGTGTGTAATGGTGAAGGGAGAGGATAGACCCACAATGAAAGAAGTGGCAATGGAGCTTGGGGGATTAAGAATTCCGGAAAAGCTCCCATGGGGATGGGGAGAAAATGACATGTCTTCAGAAGAGACTGAGTATTTGCTGAAATCAACTCCACCACCTCACATTGTTGATGTTGGAGATGGTTTAGTTGGTAGCAGTAAAACAACTGACATAGAAAGCATGAAGCAGATTTCTGTGCCATTGGGTGGTGGAAGATGA 2289 0.4102 MVLNRTMHMKTAMVWVIALATAARTAAQAFPGCLSICGGVKIHYPFGVGTQSDTGKDCFLDKLFSLTCDHDSKLWTTQSHNSQTEYTQSQIESIDLKGKMDILMPISRICFNESGVAVADEQPWLGIPTFTVSDKENKFITVGCNTYGYLNGFVNNLNYSTGCLSKCSRMLNEQDSKTCSGIGCCQVDISMRMRDFQVDAYSFDFNRNVWVFNNCSYSFVAKNGWFNFSVDHLTSLPFSATPLVIDWAVGNETCESAYKSEDYVCSSNHTECEDTDTRDGYRCKCREGYEGNPYHPDGCQDINECKVSKPCVEEAECHEEPGNYSCTCREGFEGDGRVGGKGCERKFNSNTSLVIALSVSISVIALLVGSFYVYWGLRKRRLTKLKEIFFQQNGGILLQQQIGASGGSAAAMKIFTLEDLKKATNNFDERRILGQGGHGTVYKGVLEDSTLVAIKKSKICDQSQVEQFINEVVVLTQINHRNVVKLFGCCLETEVPLLVYEFITNGTLSEHLHNQGQSSQLSWTMRLRVAAETAGALAYLHSAASTPIIHRDVKTANILLDDRLTAKVSDFGASRLVPIDQTQITTLVQGTFGYLDPEYFHTSQLTEKSDVYSFGVVLAELLTSKKALSFDRPEEDRNLAVYFLSSLNKGQLPEILDNYIINEANFEQLMEVANIARRCVMVKGEDRPTMKEVAMELGGLRIPEKLPWGWGENDMSSEETEYLLKSTPPPHIVDVGDGLVGSSKTTDIESMKQISVPLGGGR 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00196 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Bach13g00196 762 CDD STKc_IRAK 433 700 - -
Bach13g00196 762 Gene3D Laminin 252 340 - -
Bach13g00196 762 SUPERFAMILY EGF/Laminin 300 335 - -
Bach13g00196 762 SMART egf_5 304 344 IPR000742 -
Bach13g00196 762 SMART egf_5 253 300 IPR000742 -
Bach13g00196 762 SUPERFAMILY Protein kinase-like (PK-like) 411 696 IPR011009 -
Bach13g00196 762 FunFam Fibrillin 2 296 339 - -
Bach13g00196 762 ProSiteProfiles EGF-like domain profile. 301 344 IPR000742 -
Bach13g00196 762 Pfam Protein tyrosine and serine/threonine kinase 430 697 IPR001245 GO:0004672|GO:0006468
Bach13g00196 762 FunFam Wall-associated receptor kinase 2 503 721 - -
Bach13g00196 762 SMART serkin_6 427 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00196 762 SMART egfca_6 301 344 IPR001881 GO:0005509
Bach13g00196 762 SMART egfca_6 254 300 IPR001881 GO:0005509
Bach13g00196 762 ProSiteProfiles Protein kinase domain profile. 427 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00196 762 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 711 IPR045274 GO:0007166
Bach13g00196 762 CDD EGF_CA 301 335 - -
Bach13g00196 762 FunFam Wall-associated receptor kinase 2 397 502 - -
Bach13g00196 762 ProSitePatterns Protein kinases ATP-binding region signature. 433 456 IPR017441 GO:0005524
Bach13g00196 762 Gene3D Transferase(Phosphotransferase) domain 1 503 705 - -
Bach13g00196 762 Gene3D Phosphorylase Kinase; domain 1 399 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00196 Bach-Chr13 5337812 5341608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00196 7 724 Receptor kinase-like Gene Family AT1G21230 44.414 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bach13g00196 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00196 - - jre:108997248 779.245