Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach13g00191 | ATGGAAGCATCTTCTTCTAAGAAGCTCTCTGTATTCCTTCTGATATTATTTGCCTCTAGCTCCATCTTATACCCAGCACAAGCCATTGAAAAATCACTCCAAGAAGCCAGCATTCAATTCGTCAGAACATCTTGTAGCACCACAACATACCCAAGACTTTGCTTTAGCTCTCTTGCAAAGCATGCAAGCTTCATCCAATCAAACCGAGTGCTTCTAGCGGGCGCATCCCTTAATGATACTCTTGCTTCTGCAAAAGCAACTTCTGTTTTAATGTCAACTCTTTCTAAGAGCCATGGCCTGAAGCCAAGAGAGGTTGCTGCCATGAAAGATTGTGTGGAAGAGCTGAGTGACTCTGTTGATGAACTGCGAAAGTCCATTAATGAGATGTCTCATCTCAGAAACTCCAATTTTGACCTAACTGTTAATGATGTCCAGACTTGGGTTAGTGCTGCTTTGACAGATGAGAGCACATGCACTGATGGATTCCAAGGGATCAATGGAAATGTTAAGGTAATGGTGAGAGGGAGAATTGTGCAGGTTGCACAATTAACCACCAATGCCTTGGCTTTGATAAATCAGGTAGCTTCTTTCCATGGTTAA | 600 | 0.4267 | MEASSSKKLSVFLLILFASSSILYPAQAIEKSLQEASIQFVRTSCSTTTYPRLCFSSLAKHASFIQSNRVLLAGASLNDTLASAKATSVLMSTLSKSHGLKPREVAAMKDCVEELSDSVDELRKSINEMSHLRNSNFDLTVNDVQTWVSAALTDESTCTDGFQGINGNVKVMVRGRIVQVAQLTTNALALINQVASFHG | 199 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach13g00191 | 199 | Pfam | Plant invertase/pectin methylesterase inhibitor | 40 | 190 | IPR006501 | GO:0004857 | |
| Bach13g00191 | 199 | FunFam | Pectinesterase inhibitor 3 | 36 | 195 | - | - | |
| Bach13g00191 | 199 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 36 | 195 | IPR035513 | - | |
| Bach13g00191 | 199 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 40 | 194 | IPR035513 | - | |
| Bach13g00191 | 199 | NCBIfam | pectinesterase inhibitor domain | 10 | 194 | IPR006501 | GO:0004857 | |
| Bach13g00191 | 199 | Coils | Coil | 112 | 132 | - | - | |
| Bach13g00191 | 199 | SMART | PMEI_2 | 36 | 190 | IPR006501 | GO:0004857 | |
| Bach13g00191 | 199 | CDD | PMEI-like_3 | 43 | 196 | - | - | |
| Bach13g00191 | 199 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 11 | 190 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach13g00191 | Bach-Chr13 | 5246466 | 5247065 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach13g00191 | 32 | 194 | Carbohydrate Esterase | AT1G53830 | 31.548 | 9.10e-21 | 87.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach13g00191 | - | - | gmx:100305537 | 244.588 |