Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00189 ATGTCTCTGTCATACCTGAGTACTGGAGAGCATGATGAACTAATGCAAAATCTTGCTAATAAAAGCTCTGCTCAGTTTTTTCATATTCCCCCTGTTCCTATTGCCAAGATTTCAGACAGAATACTGCAAATTGAAGGCATTTTCAGTGGGACATTGAGTTATATCTTTAACAACTTCAAAGATGGTCGAGCTTTTAGTGAGGTAGTGGCTGAAGCAAAGGAAGCAGGATATACCGAGCCAGATCCGAGGGATGATCTGTCTGGAACAGATGTTGCAAGAAAGGTGATAATTATTGCGAGGGAGTCTGGTTTAAAGCTAGAACTCTCTGATATCCCTGTTGAAAGCCTTGTACCAGAACCACTAAGAGTTAGTGCATCAGCTCAGGATGATGGACTGCTTCATACTACATGTGGAACTCCAAATTATGTTGCTCCTAAGGAGCCCTTTGTAAACATCCCAGAAGATGCAATCCGTGAAGCGCTGAAGATTCTTCTTGATGTCAGGAACCACCCAATTTTGATTCACTGTAAGTGGGGGAAGCACCGAACAGGTTGCCTTGTAGGATGCTTGAGGAAACTGCAGATGTGGTGCTTGTCTTCTGTGTTTGATGAGTACCAAAGGTTTGCAGCTGCCAAAGCAAGAGTTTCAGACCAGAGATTTGTGGAGTTGTTTGATATTTCGAGCCTGAAGCACTTGCCAATTCCATTTTCTTGTTCAAAGAGGTAG 726 0.4298 MSLSYLSTGEHDELMQNLANKSSAQFFHIPPVPIAKISDRILQIEGIFSGTLSYIFNNFKDGRAFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIIIARESGLKLELSDIPVESLVPEPLRVSASAQDDGLLHTTCGTPNYVAPKEPFVNIPEDAIREALKILLDVRNHPILIHCKWGKHRTGCLVGCLRKLQMWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSLKHLPIPFSCSKR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00189 241 ProSitePatterns Homoserine dehydrogenase signature. 72 94 IPR019811 GO:0006520
Bach13g00189 241 Gene3D Dihydrodipicolinate Reductase; domain 2 37 128 - -
Bach13g00189 241 Pfam Tyrosine phosphatase family 146 231 IPR004861 -
Bach13g00189 241 Pfam Homoserine dehydrogenase 38 127 IPR001342 GO:0006520
Bach13g00189 241 ProSitePatterns Tyrosine specific protein phosphatases active site. 174 184 IPR016130 GO:0016311|GO:0016791
Bach13g00189 241 PANTHER - 37 129 IPR011147 GO:0004072|GO:0004412|GO:0009067
Bach13g00189 241 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 37 128 - -
Bach13g00189 241 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 146 226 IPR029021 -
Bach13g00189 241 Gene3D Protein tyrosine phosphatase superfamily 139 222 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00189 Bach-Chr13 5179780 5182751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00189 146 241 Protein tyrosine phosphatase (PTP) family AT4G03960 80.208 2.41e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00189 K18045 - gmx:100814279 185.267