Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00171 ATGAATTGGACAAGGTCATGCCACTTTGAGAAGAAATCAAAGTCTTCTCTGCAGTCTACATCACAAACAGAGAAGAAATCAAAGCCAAATTGTGAATTGTGGAAGATAGAATCTGAAGCAATGATAGCGAACGCAAGGCGTCTGAAACAACTGGTCTTGGTGTGTGCCATTGCATTAGCAGCAGTGGGAGCAGCTGTGGCTCAAGCTGAAGAAAAAGCTGAATTCGCAGCCCTACCTGGCTGCAACCACACATGTGGAAACGTTACAATACGATATCCATTTGGCACAGGCAAATCATCTACAACAGATCGAAACTGTTTCTTTGACGAACGCCTTAATCTCACTTGTGATGACTCTACATTACTTCTGGGTAATATCCCAGTTTCAAACATATCCCTCGAAGGTCAGCTGGAAGTGAAGTTCTTTATCTCCTCAGTTTGTTTTGATCAATCAGGCAATCAAGTTTCTGAAATTAAAGCCTCTGCCAAGTTGATTTATTTCACCATTTCTAGTGGGAAAAATAAGTTCTTTAGTGTTGGCTGTGACACTTATGGGTATCTCAATAATTTCCAAGATGGTCAAAACTATTCAACTGGGTGCCTAACTAGATGTAATACGGGAATGAATACAGAGAACAGTGACAGCTGTTCAGGGATTGGGTGTTGCCAGGTGGATATTCCTCTTGGAATGAAGAACATCACTACCCAAGCATATAGTTTTGATTGCTACCAAAATGTGCAGGAGAGTTTCAACCGCTGCAGCTATTCTTTTGTGCACAAATTGAATGACAACAATACTGGCTATAAGCTTTCTATCGATCATGTAAAGCATGGTCTACCATTTGAGAGGACTCCTGTGGTGCTTGATTGGGGTGTTGGGAATGAAAACGAGACATGTGAAGTTGCTCAAAATAGTGCAAACTATGCCTGCAGAAACAACAGCTATTGTAATAACACGGGCAATGGATATAGGTGCCACTGTGAACCAGGTTATCATGGAAACCCATACCTCCCGGAGGGTTGTCAAGACATCAACGAATGTGAGATACGAAGTGATAATTGTTCAAGTAATGAAAGATGTAATAACACCATCGGAGATTTTATATGTGTCTGCATCGAGGGGTATCACTGGGAAGAAAATAGCTGCCAGAAAATTCTGCAAAAAGATCCGCTTATTAAGATTGTCATCGTTGTGGGAGTAGGATTTATAGCCCTACTTGTGGGCATGTCCACGACATACTTAGTATATCAAAAAAGGAAACTCATCAAGCTCAAAGAGAAATTCTTTAGGCAGAATGGGGGTTTCATTTTGCAACAACAACTCTCTAGAAGAGAAGACTCCTCTAGAAGTACAACTCAAATTTTCACGGCAGAGGAGCTAAAAAAGGCGACCAAAAACTATGATGAGAGCCTAATTGTAGGCAAAGGAGGCTATGGTACTGTTTTCAAAGGGTTTCTAACTGATAATAGGATTGTTGCCATCAAGAAGTCTAAATTGATCGACCAAAGCCAAATTGAGCAGTTCATTAATGAGGTGGTTGTTCTCTCCCAAATAAATCATAGAAATGTGGTTAAACTCTTAGGATGTTGTTTAGAGACAGAAGTTCCTTTATTAGTCTATGAATTTGTAAACAATGGCACCCTATTTGATTATATTCACAATGAAAACAAAGTTTCTTGGAAATCACGATTACGAATAGCAGCTGAAGCAGCAGGAGCATTATCATACCTTCACTCGGCTGCCTCCATTCCCATAATTCATAGAGATATCAAGACTGCAAACATTCTTCTTGACGAGACTTACACAGCCAAGGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCAATGGACCATGCAGAAATAGCAACGATAGTTCAGGGAACTATTGGATACTTGGACCCAGAATATATGCTGACAAGTCAACTCACTGAAAAAAGCGATGTGTATAGTTTTGGAGTGGTACTTGTGGAGCTGCTAACAGGGGAGAAAGTGGTTTCATTCGATCGGCCGCAAGAGAAAAGAAGTCTTGCTATGCACTTCTTGTCTTCCCTCAAAGAGAATTGCTTGTTAGAAGTTATTGATAATGGGATTGTGAATGAGGAAAATAAGGGGGAGGTGGTGGAAGTTGCAGTACTTGCATCAAAATGCTTGAGGCTAATAGGGGACGGGAGGCCCACCATGAAGGAAGTGGCAATAGAATTGGAGGGAATAAGGATGACGAACAAGCATCCATGGGGTAGCGGTAACATTGAGCTAAATTTGGAGGAGACTGAACATTTGCTCCATGAGAAATCTAGAATTTATGAACATGGCGATAGCAGCATCCATCAATATATTGGGTATGACAGCACTAAAGATCATGTACTCCTTGCCTTTGACGTTGATGGAAGATGA 2394 0.4094 MNWTRSCHFEKKSKSSLQSTSQTEKKSKPNCELWKIESEAMIANARRLKQLVLVCAIALAAVGAAVAQAEEKAEFAALPGCNHTCGNVTIRYPFGTGKSSTTDRNCFFDERLNLTCDDSTLLLGNIPVSNISLEGQLEVKFFISSVCFDQSGNQVSEIKASAKLIYFTISSGKNKFFSVGCDTYGYLNNFQDGQNYSTGCLTRCNTGMNTENSDSCSGIGCCQVDIPLGMKNITTQAYSFDCYQNVQESFNRCSYSFVHKLNDNNTGYKLSIDHVKHGLPFERTPVVLDWGVGNENETCEVAQNSANYACRNNSYCNNTGNGYRCHCEPGYHGNPYLPEGCQDINECEIRSDNCSSNERCNNTIGDFICVCIEGYHWEENSCQKILQKDPLIKIVIVVGVGFIALLVGMSTTYLVYQKRKLIKLKEKFFRQNGGFILQQQLSRREDSSRSTTQIFTAEELKKATKNYDESLIVGKGGYGTVFKGFLTDNRIVAIKKSKLIDQSQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYIHNENKVSWKSRLRIAAEAAGALSYLHSAASIPIIHRDIKTANILLDETYTAKVSDFGASRLVPMDHAEIATIVQGTIGYLDPEYMLTSQLTEKSDVYSFGVVLVELLTGEKVVSFDRPQEKRSLAMHFLSSLKENCLLEVIDNGIVNEENKGEVVEVAVLASKCLRLIGDGRPTMKEVAIELEGIRMTNKHPWGSGNIELNLEETEHLLHEKSRIYEHGDSSIHQYIGYDSTKDHVLLAFDVDGR 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00171 797 FunFam Wall-associated receptor kinase 2 436 542 - -
Bach13g00171 797 FunFam Fibrillin 2 338 383 - -
Bach13g00171 797 Pfam Protein kinase domain 469 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00171 797 FunFam Wall-associated receptor kinase 2 543 757 - -
Bach13g00171 797 Gene3D Laminin 296 344 - -
Bach13g00171 797 ProSiteProfiles EGF-like domain profile. 295 342 IPR000742 -
Bach13g00171 797 SMART serkin_6 467 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00171 797 SMART egfca_6 294 342 IPR001881 GO:0005509
Bach13g00171 797 SMART egfca_6 343 383 IPR001881 GO:0005509
Bach13g00171 797 SMART egf_5 346 383 IPR000742 -
Bach13g00171 797 SMART egf_5 298 342 IPR000742 -
Bach13g00171 797 ProSiteProfiles Protein kinase domain profile. 467 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00171 797 ProSitePatterns Calcium-binding EGF-like domain signature. 343 369 IPR018097 GO:0005509
Bach13g00171 797 CDD EGF_CA 343 376 - -
Bach13g00171 797 SUPERFAMILY Protein kinase-like (PK-like) 449 734 IPR011009 -
Bach13g00171 797 Pfam Wall-associated receptor kinase galacturonan-binding 81 136 IPR025287 GO:0030247
Bach13g00171 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Bach13g00171 797 ProSitePatterns EGF-like domain signature 2. 369 382 IPR000742 -
Bach13g00171 797 Gene3D Transferase(Phosphotransferase) domain 1 543 751 - -
Bach13g00171 797 Gene3D Laminin 345 385 - -
Bach13g00171 797 CDD STKc_IRAK 473 737 - -
Bach13g00171 797 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 316 327 IPR000152 -
Bach13g00171 797 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 360 371 IPR000152 -
Bach13g00171 797 ProSitePatterns Protein kinases ATP-binding region signature. 473 496 IPR017441 GO:0005524
Bach13g00171 797 CDD EGF_CA 310 333 - -
Bach13g00171 797 SUPERFAMILY Growth factor receptor domain 297 384 IPR009030 -
Bach13g00171 797 ProSiteProfiles EGF-like domain profile. 343 383 IPR000742 -
Bach13g00171 797 Gene3D Phosphorylase Kinase; domain 1 434 542 - -
Bach13g00171 797 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 69 740 IPR045274 GO:0007166
Bach13g00171 797 Pfam Calcium-binding EGF domain 343 381 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00171 Bach-Chr13 4832366 4835319 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00171 81 786 Receptor kinase-like Gene Family AT1G21230 47.455 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bach13g00171 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00171 - - gmx:100819535 856.67