Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00167 ATGAGGCGTCTGCAACAACTGGCCTTGGTGTGTGCCATTGCATTAGCTACGGTGGAAGCAGCTGCGGCTCAAGCTGAAGGAAAAGCTGAATTTGTAGGCCTACCTGGCGTCAAACACACATGTGGAAACGTTACAATCCGATATCCATTTGGCACAGGCAAATCAGACACAACAGATCGAAACTGTTCCTTTGACGAATCCTTTAATCTCACTTGTGATAACTCCAAATTATTTCGAGTATGTGATAGTGGAACCAACGAAGAGAACAGTAAAAGTTGTTCAGGGATTGGGTGTTGCGAGGTGGAGATTCCTCTTGGAATGAAGAACATCACTATCCGAGCATATAGTTTGGATAACTACAGATATGTCGAGCAGAGTTTAAACCGCTTCAGCTATTCTTTTGTACACAAATCGGATGGTGGTGTTGGCTATAACTTTTCTGTCGAACATGTGAAGCAGGGCCTACCATTTACAAAGGCTCCCGTGGTGCTTGATTGGGCTGTTGGCAATGAAAACAAGACATGTGAAGTTGCTGAGAAAAGTGACAAGTTTGCCTGCAAAAGCAATAACAGCAATTGTAGTTACACAGGCTATGGATATAGGTGTAACTGTAAACCAGGTTACCGTGGAAACCCATACCTCTCCAAAGGTTGTCAAGTTGCAGGTGTAGGATTTATAGCCCTAGTTGTGGGATTGTCCGCTACATACTTGGTATACAAGAAAAGGAAACTCATCAAACTTAAAGAGAAATTCTTTAGGCAGAATGGGGGTTTTATTTTGCAGCAGCAACTCTTTTCAGGAGAAGACTCCTCTAGAAGTACAACTCAGATTTTCACGGCAGAAGAGCTAAAGAAGGCTACAAAAAACTATGATGACAGCTTAATAATAGGCAAAGGAGATTATGGTACTGTATTCAAAGGGTTTCTTACCGATAATAGGATTGTTGCCATCAAGAAGTCTAAATTAGTGGACCAGAGCCAAATTGAGCAGTTTATTAATGAGGTGGTTGTTCTCTCCCAAATAAATCATAGGAATGTGGTCAAGCTCTTAGGTTATTGCTTAGAGACAGAAGTTCCTTAA 1080 0.4167 MRRLQQLALVCAIALATVEAAAAQAEGKAEFVGLPGVKHTCGNVTIRYPFGTGKSDTTDRNCSFDESFNLTCDNSKLFRVCDSGTNEENSKSCSGIGCCEVEIPLGMKNITIRAYSLDNYRYVEQSLNRFSYSFVHKSDGGVGYNFSVEHVKQGLPFTKAPVVLDWAVGNENKTCEVAEKSDKFACKSNNSNCSYTGYGYRCNCKPGYRGNPYLSKGCQVAGVGFIALVVGLSATYLVYKKRKLIKLKEKFFRQNGGFILQQQLFSGEDSSRSTTQIFTAEELKKATKNYDDSLIIGKGDYGTVFKGFLTDNRIVAIKKSKLVDQSQIEQFINEVVVLSQINHRNVVKLLGYCLETEVP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00167 359 ProSiteProfiles Protein kinase domain profile. 290 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00167 359 SUPERFAMILY Protein kinase-like (PK-like) 271 355 IPR011009 -
Bach13g00167 359 Pfam Wall-associated receptor kinase galacturonan-binding 40 76 IPR025287 GO:0030247
Bach13g00167 359 FunFam Wall-associated receptor kinase-like 10 308 359 - -
Bach13g00167 359 Pfam Protein kinase domain 293 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00167 359 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 37 359 IPR045274 GO:0007166
Bach13g00167 359 Gene3D Phosphorylase Kinase; domain 1 262 359 - -
Bach13g00167 359 ProSitePatterns Protein kinases ATP-binding region signature. 296 319 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00167 Bach-Chr13 4782354 4784336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00167 80 359 Receptor kinase-like Gene Family AT1G21230 38.529 1.79e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bach13g00167 Pkinase 8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00167 - - jre:109017900 282.337