Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00163 ATGATAGCGAACGCAAGGCGTCTGCAACAACTGGCCTTGGTGTGTGCCATTGCATTAGCATCAGTGGGAGCAGCTGCAGCTACAGTTCAAGCTCAAGATCCTGTTGCCCTAGATGGCTGCAACCACACATGTGGAAACATTGCAATCCAATATCCATTTGGCATAGGCACATCATCTAAAACAGGTGAAAACTGTTTCTTTGACAAATCCTTTAATCTCACTTGTAAAAACTCCACATTATTTCGGGGTACTATCCCAATTTTAAACATATCCCTTGAACGTCATGAAATGGAAGTGAACACTTCTGTCTCCTCAGTTTGCTATGATGCATTAGGCAAAAAAATTAACGGTTCAAAGGGCTACAGATTGCGCATGCGTTCTTACACCATTTCTAGTGAGAAGAACAAGTTCTTCAGTGTTGGATGTGACGCTTATGGCTTTCTCAATAGTTTCCAAGATGGTAAAAACTATTCAACTGGGTGCTTAACAGTATGTGGTAATGGAACCAACGAAGAGAACAGTAAAAGTTGTTCAGGGATTGGATGTTGCCAGGTGGAGATTCCTCTTGGAATGAAGAACATCAGTATCCGAGCATATAGTTTGGATAACTACAGATATGTCGAGAAGAGTTTAAACCGCTGCAGCTATTCTTTTGTACACAAATCGGATGGTGGTGTTGGCTATAACTTTTCTGCCGAACATGTGAAGCAGGGTCTACCATTTACAAAGGCTCCCGTGGTGATTGATTGGGCTGTTGGTAATGAAAACGAGACATGTGAAGTTGCTGAGAAAAGCGACAAGTTTGCCTGCAAAAGCAATAACAGCAATTGTAGTGAGACAGGCTATGGATATAGGTGTAACTGTAAAGAAGGTTATCATGGAAACCCATACCTCTCCGAAGGTTGTCAAGACAGGGACGAATGTGACACATCACGTCATAATTGTTTAAGTAATGAAAGATGTGAAAACACCCTCGGTAGTTTTAAATGTGTCTGCAAGGAGGGGTATGAAAGAGAAGGAAATAGCTGCCAGCCAAAAGATCCGCCGCTTATTACGATTGTCACCATTGCAGGTGTAGCATTTATAGCCCTAGTTGTGGGATTGTCCACTACATACTTGGCATACAAGAAAAGGAAACTCATCAAGCTTAAAGAGAAATTCTTTAGGCAGAATGGGGGTTTTATTTTGCAGCAGCAACTCTTTTCAAGAGAAGACTCCTCTAGAAGTACAACTCAAATTTTCACAGCAGAAGAGCTAAAGAAGGCTACAAAAAACTATGATGACAGCTTAATAATAGGCAAAGGAGGTTATGGTACTGTATTCAAAGGGTTTCTTACCGATAATAGGATTGTTGCCATCAAGAAGTCTAAATTAGTGGACCAGAGCCAAATTGAGCAGTTTATTAATGAGGTGGTTGTTCTCTCCCAAATAAACCATAGGAATGTGGTCAAGCTCTTAGGTTGTTGCTTAGAGACAGAAGTTCCTTTATTAGTCTATGAATTTGTGAACAATGGCACCTTATTTGATTATATTCACGATGAAAACAAAGTTTCTTGGAGAACACGTTTACGAATAGCAACAGAAGCAGCAGGAGCATTATCATACCTTCACTCAGCTGCCTCCATTCCCATAATCCATAGAGATGTCAAGACTGCAAATATTCTTCTTGATGAAACTTACACAGCTAAGTGA 1692 0.406 MIANARRLQQLALVCAIALASVGAAAATVQAQDPVALDGCNHTCGNIAIQYPFGIGTSSKTGENCFFDKSFNLTCKNSTLFRGTIPILNISLERHEMEVNTSVSSVCYDALGKKINGSKGYRLRMRSYTISSEKNKFFSVGCDAYGFLNSFQDGKNYSTGCLTVCGNGTNEENSKSCSGIGCCQVEIPLGMKNISIRAYSLDNYRYVEKSLNRCSYSFVHKSDGGVGYNFSAEHVKQGLPFTKAPVVIDWAVGNENETCEVAEKSDKFACKSNNSNCSETGYGYRCNCKEGYHGNPYLSEGCQDRDECDTSRHNCLSNERCENTLGSFKCVCKEGYEREGNSCQPKDPPLITIVTIAGVAFIALVVGLSTTYLAYKKRKLIKLKEKFFRQNGGFILQQQLFSREDSSRSTTQIFTAEELKKATKNYDDSLIIGKGGYGTVFKGFLTDNRIVAIKKSKLVDQSQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYIHDENKVSWRTRLRIATEAAGALSYLHSAASIPIIHRDVKTANILLDETYTAK 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00163 563 Gene3D Laminin 255 344 - -
Bach13g00163 563 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 30 563 IPR045274 GO:0007166
Bach13g00163 563 ProSiteProfiles EGF-like domain profile. 304 344 IPR000742 -
Bach13g00163 563 ProSitePatterns EGF-like domain signature 2. 330 343 IPR000742 -
Bach13g00163 563 SMART serkin_6 426 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00163 563 FunFam Fibrillin 2 299 344 - -
Bach13g00163 563 Gene3D Phosphorylase Kinase; domain 1 394 501 - -
Bach13g00163 563 ProSiteProfiles Protein kinase domain profile. 426 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00163 563 Pfam Protein kinase domain 429 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00163 563 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 321 332 IPR000152 -
Bach13g00163 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Bach13g00163 563 Gene3D Transferase(Phosphotransferase) domain 1 502 563 - -
Bach13g00163 563 SMART egfca_6 304 344 IPR001881 GO:0005509
Bach13g00163 563 Pfam Wall-associated receptor kinase galacturonan-binding 40 100 IPR025287 GO:0030247
Bach13g00163 563 ProSitePatterns Protein kinases ATP-binding region signature. 432 455 IPR017441 GO:0005524
Bach13g00163 563 CDD EGF_CA 304 344 - -
Bach13g00163 563 SMART egf_5 258 303 IPR000742 -
Bach13g00163 563 SMART egf_5 307 344 IPR000742 -
Bach13g00163 563 SUPERFAMILY EGF/Laminin 302 349 - -
Bach13g00163 563 FunFam Wall-associated receptor kinase 2 395 501 - -
Bach13g00163 563 SUPERFAMILY Protein kinase-like (PK-like) 407 563 IPR011009 -
Bach13g00163 563 ProSitePatterns Calcium-binding EGF-like domain signature. 304 330 IPR018097 GO:0005509
Bach13g00163 563 Pfam Calcium-binding EGF domain 304 343 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00163 Bach-Chr13 4693836 4699258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00163 14 563 Receptor kinase-like Gene Family AT1G21230 45.359 4.07e-141 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bach13g00163 Pkinase 6.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00163 - - gmx:100819535 601.282