Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00162 ATGAAGGCGACGCATATGCAGCGACTGGCCTTGCTGTGTGCCATTGCATTAGCAACGGTGGGAGCAGCTGCAGCTCAACCTCAAGTTCAAGATCCTGTTGCCAAACCAGGCTGCAACGGCACCTGCGGAAATCTGACAATCCCATATCCATTCGGCATAGGCCAATCAAATACAACAGGTGAGAACTGTTTCTTAAATGAATCCTTTGAACTCACTTGTCAAGACTCTGAATTAATTCTGGGTGAAAATATCGATATTTCAAACATATCCCTCGAAGGTCAACTGGAAGTTTCCTTCTACGTCTCCTCAGTTTGTTTTGATGAATTCGGCAATGAAACTGAACCTTCAAATGAAGCCTATTTCCGGCTTCGTTATCTCACTATTTCTAGTGAGAAGAACAAGTTCTACAGTGTTGGATGTAACACTTATGGGTATCTCAATAGTTTCCGAAATGGTCAAGATTATTCAACCGGGTGCGTAACAAGATGTGGTACCGTACCCGATGTTGAGAACAGTAACACTTGTTCAGGGATTGGGTGTTGCGAGGTGAAAATTCCTCACGGAATGAAGAACATCACTATCGAAGCATTTACTTTTAATAATCGCCCACTTGATTTCAACAACTGCAGCTATTCCTTTGTACACAAGTTAGATGAGAACGGGGAAGGGTATCACTTTGATAAAGATCATTTATGGCGTCTACCTTTTCGTGAGGCTCCCATGGTACTTGATTGGGTTGTTACGAATGAGACATGTAAAGTTGCTGGGGATAGTTTTTGCATATTCAAGAACAGCCATTGCAATGATACACTCAATGGATTTAGGTGCGTCTGTGATCCTGGTTATTATGGAAACCCATACCTTCTTGAGGGTTGCCAAGACATCAACGAATGCAAGCCATCAAATCCTTGTACAAATAATAAAATATGCAATAATACCATCGGAAATTATACATGTGTCTGCAAGGTGGGATATAAAGAGGAAGGAGATAGCTGCCAGAAAATTCTGCAAAATGATCCGCTTATTAAGGTTGCAGTCGTTGTGGGTGTTGGATTTATAGCCCTACTTGTGGGCATGTCCACGACATACATAGTATATCAAAAAAGGAAACTCATCAAGCTCAAAGAGAAATTCTTTAGGCAGAATAGGGGTTTCATTTTGCAACAACAACTCTCTAGAAGAGAAGACTCCTCTAGAAGTACAACTCAAATTTTCACGGCAGAGGAGCTAAAGAAGGCGACCAAAAACTATGATGAGAGCTTAATTGTAGGCAAAGGAGGCTATGGTACTGTTTTCAAAGGGTTTCTAAGTGATAATAGGATTGTTGCCATCAAGAAGTCTAAATTGATCGACCAAAGCCAAATTGAGCAGTTCATTAATGAGGTGGTTGTTCTCTCCCAAATAAATCATAGAAATGTGGTTAAACTCTTAGGATGTTGTTTAGAGACAGAAGTTCCTTTATTAGTCTATGAATTTGTAAACAATGGCACCCTATTTGATTATATTCACAATGAAAACAAAGTTTCTTGGAAAACACGATTACGAATAGCAGCTGAAGCAGCAGGAGCATTATCATACCTTCACTCGGCTGCCTCCATTCCCATAATCCATAGAGATGTCAAGACTGCAAACATTCTTCTTGACGAGACTTACACAGCCAAGGTGTCTGATTTTGGAGCTTCAAGAGTGGTTCCAATGGACGATGCAGAAATAGCCACGGTAGTTCAAGGAACTATTGGATACTTAGACTCAGGATATATGCTGACAAGTCAACTCACTGAAAAGAGCGATGTGTATAATTTTGGAGTGGTACTTGTGGAGTTGCTAACAGGGGAGAAAGTGGTTTCATTCGATCGGCCGCAAGAGAAAAGAAGTCTTGCTATGCACTTCTTGTCTTCCCTCAAAGAGAATTGCTTGTTTGAAGTTATTGATAATGGGATTGTGAATGAAGAAAATAAGGGGGAGGTTGTGAAAATTGCAGTACTCGCATCAAAATGCTTGAGGCTAATACGGGAGGAGAGGCCCACCGTGAAGGAAGTGGCAATGGAGTTGGAGGGAAAAAGGATGACGAACAAGCATCCATGGGTAGCGGTAACATTGAGCTTAATTTGGAGGAGACTGAACATTTGCTCCATGAAAAATCTAGAATTTATGAACATGGTGATAGCAGCATCCATCAATATATGGGGTATGACAGCACTAAAGATCATGTACTCCTAG 2220 0.4108 MKATHMQRLALLCAIALATVGAAAAQPQVQDPVAKPGCNGTCGNLTIPYPFGIGQSNTTGENCFLNESFELTCQDSELILGENIDISNISLEGQLEVSFYVSSVCFDEFGNETEPSNEAYFRLRYLTISSEKNKFYSVGCNTYGYLNSFRNGQDYSTGCVTRCGTVPDVENSNTCSGIGCCEVKIPHGMKNITIEAFTFNNRPLDFNNCSYSFVHKLDENGEGYHFDKDHLWRLPFREAPMVLDWVVTNETCKVAGDSFCIFKNSHCNDTLNGFRCVCDPGYYGNPYLLEGCQDINECKPSNPCTNNKICNNTIGNYTCVCKVGYKEEGDSCQKILQNDPLIKVAVVVGVGFIALLVGMSTTYIVYQKRKLIKLKEKFFRQNRGFILQQQLSRREDSSRSTTQIFTAEELKKATKNYDESLIVGKGGYGTVFKGFLSDNRIVAIKKSKLIDQSQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYIHNENKVSWKTRLRIAAEAAGALSYLHSAASIPIIHRDVKTANILLDETYTAKVSDFGASRVVPMDDAEIATVVQGTIGYLDSGYMLTSQLTEKSDVYNFGVVLVELLTGEKVVSFDRPQEKRSLAMHFLSSLKENCLFEVIDNGIVNEENKGEVVKIAVLASKCLRLIREERPTVKEVAMELEGKRMTNKHPWVAVTLSLIWRRLNICSMKNLEFMNMVIAASINIWGMTALKIMYS 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00162 739 ProSiteProfiles EGF-like domain profile. 294 333 IPR000742 -
Bach13g00162 739 ProSitePatterns Protein kinases ATP-binding region signature. 423 446 IPR017441 GO:0005524
Bach13g00162 739 SMART egfca_6 252 293 IPR001881 GO:0005509
Bach13g00162 739 SMART egfca_6 294 333 IPR001881 GO:0005509
Bach13g00162 739 Gene3D Phosphorylase Kinase; domain 1 382 492 - -
Bach13g00162 739 SMART serkin_6 417 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00162 739 CDD EGF_CA 264 284 - -
Bach13g00162 739 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 689 IPR045274 GO:0007166
Bach13g00162 739 Pfam Calcium-binding EGF domain 294 332 IPR001881 GO:0005509
Bach13g00162 739 Pfam Protein kinase domain 419 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00162 739 ProSitePatterns EGF-like domain signature 2. 319 332 IPR000742 -
Bach13g00162 739 FunFam Wall-associated receptor kinase 2 386 492 - -
Bach13g00162 739 CDD EGF_CA 294 333 - -
Bach13g00162 739 ProSitePatterns Calcium-binding EGF-like domain signature. 294 319 IPR018097 GO:0005509
Bach13g00162 739 SUPERFAMILY Protein kinase-like (PK-like) 399 685 IPR011009 -
Bach13g00162 739 Gene3D Laminin 250 295 - -
Bach13g00162 739 FunFam Wall-associated receptor kinase 2 493 702 - -
Bach13g00162 739 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 267 278 IPR000152 -
Bach13g00162 739 ProSiteProfiles Protein kinase domain profile. 417 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00162 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Bach13g00162 739 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 310 321 IPR000152 -
Bach13g00162 739 Gene3D Laminin 296 335 - -
Bach13g00162 739 SUPERFAMILY EGF/Laminin 293 332 - -
Bach13g00162 739 SMART egf_5 251 293 IPR000742 -
Bach13g00162 739 SMART egf_5 297 333 IPR000742 -
Bach13g00162 739 Pfam Wall-associated receptor kinase galacturonan-binding 38 94 IPR025287 GO:0030247
Bach13g00162 739 Gene3D Transferase(Phosphotransferase) domain 1 493 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00162 Bach-Chr13 4643214 4653239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00162 35 695 Receptor kinase-like Gene Family AT1G21250 45.441 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bach13g00162 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00162 - - gmx:100819535 818.535