Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00159 ATGATAGCGAACGCAAGGCGTCTGCAACAACTGGCCTTGCTGTGTGCCATTGCATTAGCAACGGTGGTGGAAGCAGCTGCGACTCAAGCTGAAGAAAAAGCTGAATTTGTAGCACTAGAAGGCTGCAAACACACATGTGGAAACGTTACAATACGATATCCATTTGGCACAGGAAAATCATCTACAACAGACCAAAACTGTTTCTTTGACGAATCCTTTGATCTCACTTGTAATGACTCTACATTACTTCTGGGTAATGTCCCAGTTACAAACATATCCCTCGAAGGTCAGTTGGAAGTGAACTTTTTTGTCTCCTCAGCTTGTTATGATGAATTAGGCCATCCACTTGATTCAAATACTCCTTCGTTCAGGTTGGCTAACTACACCATTTCTAGTGAGAAGAACAAGTTCTTCAGTGTTGGCTGTGACACTTACGGGTATCTCAATAGTTTCCAAAATGATCAAAACTATTCAACTGGATGCTTAACTAGATGTAATACTGGAATCAATACAGAGAACAGTAGAAATTGTTCAGGGATTGGGTGTTGCCAGGTGGAGATTCCTCTTGGAATGAAGAACATCAATATCCAAGCATATACATTTGATAACTACACGTTTGTCGAGCCGAGTTTAAACCCCTGCAGCTATTCTTTTGTACACAAATCGGATGGTGGTGTTGTCTATAACTTTTCTGACGAACATGTGAAGCAGGGTCTACCATTTACGAAGGCTCCCATGGTGCTTGATCGGGATGTTGGGAATAAAATCGAGACATGTGAAGTTGCTCATAATAGTGCGAACTATGCCTGCAGAAACAACAGCTATTGTAAATTGTCGGGCAATGGATATAGGTGCCACTGTGAACCAGGTTATCATGGAAACCCATACCTCCCAGATGGTTGTCAAGACATCGACGAATGCAAGCCACCAAGTCATAATAATTGTTCAAGTAATGAAATATGTAATAATACCAGCGGAAATTATACATGTATCTGCAAGGAGGGGTATAAAGAGGAAGGAGAAAGCTGTCAGAAAATTATGCAAAATGATCCGCTTATTAAGGTTGTCATCGTTGTGGGTGTGGGATTTATAGCCCTACTTGTGGGCATGTCCACGACATACTTAGTATATCAAAAAAGAAAACTCATCAAGCTCAAAGAGAAATTCTTTAGGAAGAATGGGGGTTTCATTTTGCAACAACAACTCTTTGGAAGAGAAGACTCCTCTAGAAGTACAACTCAAATTTTCACGGCAGAGGAGCTAAAAAAGGCGACCAAAAACTATGATGAGAGCTTAATTGTAGGCAAAGGAGGCTATGGTACTGTTTTCAAAGGGTTTCTAACTGATAATAGGATTGTTGCCATCAAGAAGTCTAAATTAATCGACCAAAGCCAAATTGAGCAGTTCATTAATGAGGTGGTTGTTCTCTCCCAAATAAATCATAGAAATGTGGTTAAGCTCTTAGGATGTTGTTTAGAGACGGAAGTTCCTTTATTAGTCTATGAATTTGTAAACAATGGCACCCTATTTGATTGTATTCAAAATGAAAACAAAGTTTCTTGGAAAACACGATTACGAATAGCAGCTGAAGCAGCAGGAGCATTATCATACCTTCACTCGGCTGCCTCCATTTCCATAATCCATAGAGATGTCAAGACTGCAAACATTCTTCTTGACGAGACTTGCACAGCCAAGGTATCTGATTTTGGAGCTTCAAGATTGGTTCCAATGGACCATGCAGAAATAGCTACGGTAGTTCAGGGAACTATTGGATACTTGGACCCAGAATATATGCTGACAAGTCAACTTACTGAAAAAAGCGATGTGTATAGTTTTGGAGTGGTACTTGTGGAGCTGCTAACAGGGGAGAAAGTGGTTTCATTCGATCGGCCGCAAGAGAAAAGAAGTCTTGCTATGCATTTCTTGTCTTCCCTCAAAGAGAATTGCATGTTTGAAGTTATTGAAATTGGCATTGTGAATGAAGAGAATAAGGGGGAGGTGGTGGAAGTTGCAATACTTGCATCAAAGTGCTTGAGACTAATTGGGGAGGAGAGGCCTAGCATGAAGGAAGTGGCATTGGAGTTAGAGGGAATAAAGATGATGAAGCATCCATGGGGTAACAGCAACATAGAACTTAATTTGGAGGAGACTGAACAGTTGCTGCAAGAGGAATCTAGAATTCACGAACGTGGTAATAGCAGCACCCATCAAAATAGTGGGTATGACAGCATTAAAGATCATGTAGTCGTTGCCTTTGACGTCGATGGAAGATGA 2274 0.4081 MIANARRLQQLALLCAIALATVVEAAATQAEEKAEFVALEGCKHTCGNVTIRYPFGTGKSSTTDQNCFFDESFDLTCNDSTLLLGNVPVTNISLEGQLEVNFFVSSACYDELGHPLDSNTPSFRLANYTISSEKNKFFSVGCDTYGYLNSFQNDQNYSTGCLTRCNTGINTENSRNCSGIGCCQVEIPLGMKNINIQAYTFDNYTFVEPSLNPCSYSFVHKSDGGVVYNFSDEHVKQGLPFTKAPMVLDRDVGNKIETCEVAHNSANYACRNNSYCKLSGNGYRCHCEPGYHGNPYLPDGCQDIDECKPPSHNNCSSNEICNNTSGNYTCICKEGYKEEGESCQKIMQNDPLIKVVIVVGVGFIALLVGMSTTYLVYQKRKLIKLKEKFFRKNGGFILQQQLFGREDSSRSTTQIFTAEELKKATKNYDESLIVGKGGYGTVFKGFLTDNRIVAIKKSKLIDQSQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDCIQNENKVSWKTRLRIAAEAAGALSYLHSAASISIIHRDVKTANILLDETCTAKVSDFGASRLVPMDHAEIATVVQGTIGYLDPEYMLTSQLTEKSDVYSFGVVLVELLTGEKVVSFDRPQEKRSLAMHFLSSLKENCMFEVIEIGIVNEENKGEVVEVAILASKCLRLIGEERPSMKEVALELEGIKMMKHPWGNSNIELNLEETEQLLQEESRIHERGNSSTHQNSGYDSIKDHVVVAFDVDGR 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00159 757 SUPERFAMILY EGF/Laminin 302 341 - -
Bach13g00159 757 ProSitePatterns Protein kinases ATP-binding region signature. 434 457 IPR017441 GO:0005524
Bach13g00159 757 FunFam Wall-associated receptor kinase 2 504 718 - -
Bach13g00159 757 CDD EGF 265 296 - -
Bach13g00159 757 ProSiteProfiles EGF-like domain profile. 255 302 IPR000742 -
Bach13g00159 757 SMART egfca_6 255 302 IPR001881 GO:0005509
Bach13g00159 757 SMART egfca_6 303 344 IPR001881 GO:0005509
Bach13g00159 757 ProSitePatterns EGF-like domain signature 2. 330 343 IPR000742 -
Bach13g00159 757 SMART serkin_6 428 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00159 757 Gene3D Laminin 306 347 - -
Bach13g00159 757 Pfam Calcium-binding EGF domain 303 343 IPR001881 GO:0005509
Bach13g00159 757 SUPERFAMILY Protein kinase-like (PK-like) 410 696 IPR011009 -
Bach13g00159 757 Pfam Protein kinase domain 430 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00159 757 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 321 332 IPR000152 -
Bach13g00159 757 Gene3D Phosphorylase Kinase; domain 1 403 503 - -
Bach13g00159 757 SMART egf_5 258 302 IPR000742 -
Bach13g00159 757 SMART egf_5 306 344 IPR000742 -
Bach13g00159 757 ProSiteProfiles Protein kinase domain profile. 428 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00159 757 FunFam Wall-associated receptor kinase 2 397 503 - -
Bach13g00159 757 Coils Coil 707 727 - -
Bach13g00159 757 Gene3D Transferase(Phosphotransferase) domain 1 504 714 - -
Bach13g00159 757 ProSitePatterns Calcium-binding EGF-like domain signature. 303 330 IPR018097 GO:0005509
Bach13g00159 757 CDD EGF_CA 303 344 - -
Bach13g00159 757 Pfam Wall-associated receptor kinase galacturonan-binding 42 97 IPR025287 GO:0030247
Bach13g00159 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Bach13g00159 757 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 709 IPR045274 GO:0007166
Bach13g00159 757 FunFam Fibrillin 2 298 344 - -
Bach13g00159 757 CDD STKc_IRAK 434 698 - -
Bach13g00159 757 Gene3D Laminin 256 305 - -
Bach13g00159 757 ProSiteProfiles EGF-like domain profile. 303 344 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00159 Bach-Chr13 4571183 4574047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00159 40 757 Receptor kinase-like Gene Family AT1G21230 47.568 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bach13g00159 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00159 - - gmx:100819535 840.491