Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00155 ATGGATGCATTACCGTACCGTGTTCCCTATGAATTCATCCCTTTTAACTCTAGAGATTATGACAGCTTCAGCACAGGTTCCTTCTACGATGATTTGATACAGGAAGTCCATCTTGGAAAATTTGATGCTGCGGTGGGAGATATAACGATTACAGCTGAGAGATCGCTGTATGTGGACTTCACGTTACCTTTCACAGAAAATGAAGCAACTTTTATAGTGCCAACAAGACAGAAGAACAAGAAAGAGGCTTGGATTTTCTTGAAACCCTTGACATGGGAATTATGGGTCACTAGTGTTTGCTTCTTTGTGTTCATTGGTTTCGTGGTTTGGGTGCTGGAACATGGAGTCAATAAAGAATTTAGGGGTTCCTCCTCACATCAAGTGGGTACAAGCCTTTGCTCTTCTTTCTCAACCTTGGTTTTTACACGATGGGAAAGAATCCATAGCAAGTTGGCAAAGTTTGTGGTGATCATATGGATTTTTGTGGGGCTGATATTGACACAGAGTTATACAGCTAGCTTGACGACACTTTTGACAGTGGAACAACTCGGACCAGCCGTGACTGATGTAAACCAGCTCATACAGAATGGAGACTTTGTTGGATACCAATATAGTTCCCATATGATTCAATTCTTAAAGCAAATGGGTTTTCCTGAGACCAAGCTTCGAGCTTATAAGTCTGCAGAAGAATGCGATCACCTTCTATCAATGGGAAGCAGAAATGGAGGTATCACTGCCGCCTTTGATGAAACCCCATATATAAAAGTTCTGCAGTCAAAATATTGCTCCAAATATACAACCATTGGACCTACATTTCGGGCTCAAGGATTTGGTTTTGCTTTTAAAAGAAACTCGCCATTCGTACCTGATGTTTCAAGGGCTATATTAAACTTGACAGAGAAAAATCAAAATATTGAGAAAGGAATTGTAGACAAGTTGTTCAGACTGAATGAATCCCGTTGTTTACAACCTTCTTCTGTGGAAGCTTCGTATAGTCTGGATCTGGACAGTTTCCGTGGACTATTCCTGCTGTCTGGGGTTGCTTCATCATCAGCACTCATCATATATACTGCTTCTTTACTATATAAACATAGGGGGAAGTTTATGCAGTTTTATGCAAACGGTTCGTTGTGGAAAAGAATGTGTATCAAATTAACAATCTTAAGACAAAAGGGTATTAGTATTCATGCCAGAGAACAGATACCCAGAACTACTACTACCATTACCAGTGATATTCATGATATAAATGTGATTGATGTCGCATGA 1266 0.3997 MDALPYRVPYEFIPFNSRDYDSFSTGSFYDDLIQEVHLGKFDAAVGDITITAERSLYVDFTLPFTENEATFIVPTRQKNKKEAWIFLKPLTWELWVTSVCFFVFIGFVVWVLEHGVNKEFRGSSSHQVGTSLCSSFSTLVFTRWERIHSKLAKFVVIIWIFVGLILTQSYTASLTTLLTVEQLGPAVTDVNQLIQNGDFVGYQYSSHMIQFLKQMGFPETKLRAYKSAEECDHLLSMGSRNGGITAAFDETPYIKVLQSKYCSKYTTIGPTFRAQGFGFAFKRNSPFVPDVSRAILNLTEKNQNIEKGIVDKLFRLNESRCLQPSSVEASYSLDLDSFRGLFLLSGVASSSALIIYTASLLYKHRGKFMQFYANGSLWKRMCIKLTILRQKGISIHAREQIPRTTTTITSDIHDINVIDVA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00155 421 SMART GluR_14 2 312 IPR001320 GO:0015276|GO:0016020
Bach13g00155 421 FunFam Glutamate receptor 83 213 - -
Bach13g00155 421 CDD GluR_Plant 1 307 - -
Bach13g00155 421 Pfam Bacterial extracellular solute-binding proteins, family 3 29 301 IPR001638 -
Bach13g00155 421 Gene3D - 1 82 - -
Bach13g00155 421 Pfam Ligand-gated ion channel 302 348 IPR001320 GO:0015276|GO:0016020
Bach13g00155 421 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 5 365 IPR015683 -
Bach13g00155 421 Gene3D - 83 221 - -
Bach13g00155 421 SUPERFAMILY Periplasmic binding protein-like II 8 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00155 Bach-Chr13 4479448 4481573 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00155 7 396 Ion Channels AT2G29100 48.205 1.43e-108 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00155 K05387 - qsa:O6P43_019176 490.345