Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00153 ATGAAACCCAATGCTTGTCTTTTAATCTTGTATGTTTCAATATGTTGTATCTGCATAGCCATGAGACGAAGCACGACCGAAGCAGTTAAATTAGTTAATGTTGGTGTGATTCTCGATACAGCTGATGAATGGATTGGCAAGTTGTGTCTGAGTTGCATCCAAATGGCACACTCGGACTTCTACGCAACCCTCAATCACTATAACACCAGGCTTGTTCTCAGAGTCAAAGATTCTAAAAGTGACCTGATTGCAGCTGCTTCGGCAGCTGTAGATTTGATAAAAAATGTAGCAGTGCAAGCCATTATAGGGCCACAAGACTCAAGGGAAGCCAACCTGATTATACAAGTTTGTAACAAAGCTAGGGTGTCAATCTTATCATTCTCAGCAACAAGTCCTTCTCTAACTTCTCCTCGGAATCCTTATTTTTACCGAATAGCCCAGAATGAATGTGCTCAAGCTCAAGCCATTTCAGCACTTGTCCAAGCTTTTGAATGGAAAGAAGTGGTGCCCATATACATACAGGACTTATATGCTGAGGAAGTAATACTTTGCATAACCAGAGCCTTGCAAGAGGCAAATATCCGTGTTTCCTATCAAGCTGCGATTCCACAATCACCACTCGACGACCGAATTGTGCAAGAGCTTCACAAATTAATAACTTTGACAACCAGAGTCTTCATTGTGCACATGTCTCCCAATCTCGGTTCCCGTCTCTTTGCCATTGCGAGGGAGATTGGGATGATGAGTGAAGGCTATGTTTGGATACTCACCTCTGAAATGACTAACCAATTAGCATCTTTAAACTCTTCAACCACTGATACGATGCAGGGTGTTCTAGGTGTAGGTGCCTATTTTCCTAAATCAAAGAAGTTTCAAGATTTTCAGGTTCGATGGAAATTAAAATTTCAACTTGAAAATCCCACCATTATAGCACCTGAATTGAATGTTTTCTGTTTATGGGCTTATGATGCTGTAACAGCACTAGCCATGGCAGTTGAGAAGTCCGGGGTTGGAGAATTTGGCTTTCAAAAGACAACTACGGATTCGAGCAATACAACCGATTTTGAAACTCTTGGGGTTTCATTGAGTGGTCCAAAACTTGGAGAATCACTGTCAAAAACCAGATTTCTAGGCCTTTCAGGGGATTTCAGTTTGGTTAAAGGAGAAGTCAACTCATCAATTTTTCAGATAATTAATGTGTTTGGTGATGGAAAAAAAGTAGTGGGATTTTGGACACCTAAAAATGGATTGGCAAGAAAACTCCATTCAACAAAGATGGATACAGAAACAGGCATATATTCAACTTCCAAGACCAATTTAGGACCAATTATATGGCCAGGGGATTCTTCCTCAGCTCCAGAAGGCTGGAATCTACTAGCAAATGGAAAGAAACTGAGAATAGCAGTTCCGTTTAATACCATATTCAGAGGATTTGTTAACGTGGATTATGATCCTGATACCCGTAGAATAAATGTCAGTGGCTACTGCATAGATATTTTCAAGGATGTAATGGAGGCATTGCCGTACCATGTTCCTTATGAGTTCATCCCTGTAAATCGAGATTATCGTAACTTCATTCAAGGTTTCTATTACGATTATTTGATAAAGGAAGTCTATCTTGGAAAATTTGATGCTGCGGTGGGAGATATAACGATTAGAGCTTGGAGGTCTCAATACGTGGACTTCACGTTACCCTTCACAGAAAATGAAGCAACTTTTGTGGTGCCTATTAAGCAGGAGAACAAGAAAGAGGCTTGGATTTTCTTAAAACCCTTGACATGGGAATTATGGGTCACAAGTTTTTGCTTCTTTGTGTTCATTGGTTTTGTGGTTTGGTTGCTGGAAAAAGGAGCCGATAAAAAATTTAGGAGCTCGCCCTCACATCAAGTGGATACGAGCCTTTGGTTTTCCTTATCCACCTTGGTATTTTCACAATGGGAAAGAATCCATAGCAACTTGGCAAAGTTTGTGGTGATCATATGGGTTTTTATGGGACTGATATTGACACAGAGTTATACAGCTAGCTTGACAACACTTTTGACAGTCGAACAGCTTCGACCAGCAGTGACAGATGTAAATCAGCTCAAACAGAATGGGGATTATGTAGGATACCATAATTCCTATCTTATTGAGTTCTTAAGGCAAATGGGTTTTGATGAAACAAAGCTTCGACCTTATAAGACTGCAGAAGAATGTGATCACCTTTTAACAATGGGAAGCAGAAATGGAGGTATCGCTGCCGCCTTTGATAAAACCCCATATATAAAAGTTCTGCAATCAAGGTATTGTTCCAAATATACAACCATTGGACCTACTTTTCAGACTCAAGGATTTGCTTTTGCTTTTAGAAGAAACTCGCCATTGGTACCTGATGTTTCAAGGGCTATCTTAAATTTGACAGAGAGAAGCCAAGTCATGAAAGCAATTGCAGATAAGTGGTTCCTGAACGAATCCCTTTGTTCACGAACCTCAACTGTGGATGCTTCGTACGTCCTAGATCTGGAAAGCTTCCGTGGACTATTCCTACTGTCTGGGATTGCCTCATCATCTGCACTCATCATACACGCAGCGATGTTCCTATACAGACATAGACAGAAGTTTGCACAGTTCCATCGAAACGGTTTACTATGGGAAAGAATTTGTGTCACGTTAACAATCATAAAACAGAAAGTCATCAGAATTCATACTGGAGAACAAATATCCAGAGCTACTACTACCACTACTAGTAATGTTGATGATGTACATGTGACTGATGTCTCTTGA 2763 0.4032 MKPNACLLILYVSICCICIAMRRSTTEAVKLVNVGVILDTADEWIGKLCLSCIQMAHSDFYATLNHYNTRLVLRVKDSKSDLIAAASAAVDLIKNVAVQAIIGPQDSREANLIIQVCNKARVSILSFSATSPSLTSPRNPYFYRIAQNECAQAQAISALVQAFEWKEVVPIYIQDLYAEEVILCITRALQEANIRVSYQAAIPQSPLDDRIVQELHKLITLTTRVFIVHMSPNLGSRLFAIAREIGMMSEGYVWILTSEMTNQLASLNSSTTDTMQGVLGVGAYFPKSKKFQDFQVRWKLKFQLENPTIIAPELNVFCLWAYDAVTALAMAVEKSGVGEFGFQKTTTDSSNTTDFETLGVSLSGPKLGESLSKTRFLGLSGDFSLVKGEVNSSIFQIINVFGDGKKVVGFWTPKNGLARKLHSTKMDTETGIYSTSKTNLGPIIWPGDSSSAPEGWNLLANGKKLRIAVPFNTIFRGFVNVDYDPDTRRINVSGYCIDIFKDVMEALPYHVPYEFIPVNRDYRNFIQGFYYDYLIKEVYLGKFDAAVGDITIRAWRSQYVDFTLPFTENEATFVVPIKQENKKEAWIFLKPLTWELWVTSFCFFVFIGFVVWLLEKGADKKFRSSPSHQVDTSLWFSLSTLVFSQWERIHSNLAKFVVIIWVFMGLILTQSYTASLTTLLTVEQLRPAVTDVNQLKQNGDYVGYHNSYLIEFLRQMGFDETKLRPYKTAEECDHLLTMGSRNGGIAAAFDKTPYIKVLQSRYCSKYTTIGPTFQTQGFAFAFRRNSPLVPDVSRAILNLTERSQVMKAIADKWFLNESLCSRTSTVDASYVLDLESFRGLFLLSGIASSSALIIHAAMFLYRHRQKFAQFHRNGLLWERICVTLTIIKQKVIRIHTGEQISRATTTTTSNVDDVHVTDVS 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00153 920 CDD PBP1_GABAb_receptor_plant 33 421 IPR044440 -
Bach13g00153 920 FunFam Glutamate receptor 585 714 - -
Bach13g00153 920 Gene3D - 585 723 - -
Bach13g00153 920 Gene3D - 150 309 - -
Bach13g00153 920 Pfam Bacterial extracellular solute-binding proteins, family 3 491 815 IPR001638 -
Bach13g00153 920 Gene3D - 316 463 - -
Bach13g00153 920 Pfam Receptor family ligand binding region 49 400 IPR001828 -
Bach13g00153 920 SUPERFAMILY Periplasmic binding protein-like I 33 447 IPR028082 -
Bach13g00153 920 Pfam Ligand-gated ion channel 816 847 IPR001320 GO:0015276|GO:0016020
Bach13g00153 920 SUPERFAMILY Voltage-gated potassium channels 596 686 - -
Bach13g00153 920 SUPERFAMILY Periplasmic binding protein-like II 442 816 - -
Bach13g00153 920 FunFam Glutamate receptor 460 584 - -
Bach13g00153 920 FunFam Glutamate receptor 152 310 - -
Bach13g00153 920 Gene3D - 464 584 - -
Bach13g00153 920 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 885 IPR015683 -
Bach13g00153 920 PIRSF IGluLR_plant 1 915 IPR017103 -
Bach13g00153 920 Gene3D - 744 778 - -
Bach13g00153 920 SMART GluR_14 466 816 IPR001320 GO:0015276|GO:0016020
Bach13g00153 920 CDD GluR_Plant 463 814 - -
Bach13g00153 920 Gene3D - 779 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00153 Bach-Chr13 4438454 4443114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00153 1 917 Ion Channels AT2G29100 43.784 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00153 K05387 - qsa:O6P43_019176 979.163