Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00152 ATGTCTCCCGTACTTGGTTCCCGTCTCTTTGCCGTTGCAAGGAAGATTGGGATTATGAGTGAAGGCTTTGTTTTGATACTCACCACTGACATGACTAACCAATTAGCCAATTTAAATTCTTCAATCACTGACACGATGCAGGGTGTTCTAGGTGTAGGTACCTATTTTCCTAAATCAAAGAAGTTTCAAGATTTTCAGTTGAGAAGTCCGGAGTCGGAGAATTTGGCTTTCAAAAACACAAGTACGGATTCCAGAAATACAACAGATTTTGAAACTCTTGGGGTTTCATTGAGTGGTCCAAGACTTGGAGAATCACTGTCAGAAACCAGATTTCATGGCCTTTCAGGGGATTTCAGTTTGGTTAAAGGAGAAGTCAACTCATCAATTTTTCAGATAATTAATGTGTTTGGTGATGGAAAAAAAGTAGTGGGATTTTGGACACCTAAAAATGGATTGTCAAGAAAACTCGATTCAACAAAGATGGATACAGACACAGGCATATATTCAACTTCCAAGACCAATTTAGGACCAATTATATGGCCAGGGGATTCTTCCTCAACTCCAGAAGGCTGGGATCTACTAGCAAACGGAAAGAAACTGAGAATAGCAGTTCCGAGTAGTACCATATTTGGAGGATTTGTTAGCGTGGATTATGATCCTGGTACCCGTACAACAAATGTCGGTGGCTACTGCATAGATGTTTTTAAGGTTGTAATGGAGGCATTGCCGTACCATGTTCCTTATGAGTTCATCCCTGTAAATCGAGATTTTCGTTACTTCAGGCCAGGTTTCTACTACGATTATTTGACAAACGAAGTCGATCTTGGAAGTTATACAGCTAGCTTGACAACACTTTTGACAGTCGAACAGCTCCGACCAGCAGTGACTGATGTAAACCAGCTCATACAGAATAGGGACTTTGTTGGATACCAATATAGTTCCGATACGATTCAATTATTAAAGGAATTGGGTTTTCATGAAACCAAGCTTCGAACGTATAAGTCTGCAGAAGAATGTGATCACCTTCTAACAATGGGAAGCAAAAATGGAGGTATCGCTGCCGCCTTTGATGAAACCCCATATATAAAAGTTCTGCAGTCAAGGTATTGTTCCAAATATACAACCATTGGACCTACTTTTCAGACTCAAGGATTTGCTTTTGCTTTTAGAAGAAACTCGCCATTTGTACTTGATGTTTCAAGGGCTATCTTAAATTTGACAGAGAGCAACCAAGTCATGAAAGCAATTGCAGATAAGTGGTTCATGAACGAATCCCTTTGTTTACAAACCTCAACTGTGGATGCTTCGTACGTCCTAGATCTGGATACCTTCCGTGGACTATACCTGCTATCTGGGATTGCCTCGTCATCTGCACTCATCATACACGCAGCTATGTTCCTATACAGACATAGACAGAAGTTTGTACAGTTCCATCGAAACGGTTTACTATGGAAAAGAATTTGTATCATGTTAACAATCATCAAACAGAAAGTCATCAGAATTCATACTGGAGAACAAATACCAAGAGCTACTACTACTACCACTACCAGTAATGTTGATGATATACAGGCGACTGATGTCTCGTGA 1587 0.4014 MSPVLGSRLFAVARKIGIMSEGFVLILTTDMTNQLANLNSSITDTMQGVLGVGTYFPKSKKFQDFQLRSPESENLAFKNTSTDSRNTTDFETLGVSLSGPRLGESLSETRFHGLSGDFSLVKGEVNSSIFQIINVFGDGKKVVGFWTPKNGLSRKLDSTKMDTDTGIYSTSKTNLGPIIWPGDSSSTPEGWDLLANGKKLRIAVPSSTIFGGFVSVDYDPGTRTTNVGGYCIDVFKVVMEALPYHVPYEFIPVNRDFRYFRPGFYYDYLTNEVDLGSYTASLTTLLTVEQLRPAVTDVNQLIQNRDFVGYQYSSDTIQLLKELGFHETKLRTYKSAEECDHLLTMGSKNGGIAAAFDETPYIKVLQSRYCSKYTTIGPTFQTQGFAFAFRRNSPFVLDVSRAILNLTESNQVMKAIADKWFMNESLCLQTSTVDASYVLDLDTFRGLYLLSGIASSSALIIHAAMFLYRHRQKFVQFHRNGLLWKRICIMLTIIKQKVIRIHTGEQIPRATTTTTTSNVDDIQATDVS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00152 528 SUPERFAMILY Periplasmic binding protein-like II 196 423 - -
Bach13g00152 528 Gene3D - 361 428 - -
Bach13g00152 528 Gene3D - 1 78 - -
Bach13g00152 528 CDD GluR_Plant 198 421 - -
Bach13g00152 528 Gene3D - 199 314 - -
Bach13g00152 528 Pfam Receptor family ligand binding region 2 135 IPR001828 -
Bach13g00152 528 SUPERFAMILY Periplasmic binding protein-like I 1 191 IPR028082 -
Bach13g00152 528 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 5 274 IPR015683 -
Bach13g00152 528 Pfam Bacterial extracellular solute-binding proteins, family 3 278 422 IPR001638 -
Bach13g00152 528 Gene3D - 97 198 - -
Bach13g00152 528 SMART GluR_14 201 423 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00152 Bach-Chr13 4420960 4424143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00152 277 486 Ion Channels AT5G27100 36.239 2.52e-33 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00152 K05387 - atri:130799296 261.151