Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00150 ATGGCAAGAATCAGAAAGGGTAATGGCCGCAAAAAGATCGAAATCAAGAAGATAAGTAAAGAGAGAAATCTTCAAGTGACTTTCTCCAGGCGTCGGAATGGACTTTTCAATAAAGCTAGTGACCTTTGCACTCTTTGTGCCGCTGAGGTTTCTCTCGTCATCTTCTCACCCAGCAAAAAAGTATTCTCATTTGGAAATTCAAGCGTTAATTATGTGGTTAATCGCTTTCTTTCTGGAGCGCTGCCACAGACCTCTGGTTCCATGCAGGAAATTGAGGCTAATCGCAACTCTAACGCGCATAACCTCAATGCTCAGCTATCTCAGCTCTCAGAGCGTCTTGATACTGAGAAGAAGCGTGTAATGATGCTGGAAACGCAACTGAAGCCTACACTGGAACAGTGTTGGTGGGCTGGTCCTATAGAGGAGATGAACATGCCTCAGCTCGAGCTGTTAATGGTGACAACGGAAAAGCTGGAAAGGTTTTTAACTCTTCAGGCTAATATGATCCGGTATCAGGATCCTAACCCACCACAGCATTTGGCTGGCAGTTCCTCTAGCTCAGTTGATCTGCCACAACAAGCACCGCCGGAGTTTATTCAACCACCAAATTTGCTGGATAGGAACATGATGCCACCACTGCCTGATGGCCAACGTCTCAACAACATGAGAGATCAGGTCCTAGATTTTATTGATCTGTTATACTTTTGA 708 0.4506 MARIRKGNGRKKIEIKKISKERNLQVTFSRRRNGLFNKASDLCTLCAAEVSLVIFSPSKKVFSFGNSSVNYVVNRFLSGALPQTSGSMQEIEANRNSNAHNLNAQLSQLSERLDTEKKRVMMLETQLKPTLEQCWWAGPIEEMNMPQLELLMVTTEKLERFLTLQANMIRYQDPNPPQHLAGSSSSSVDLPQQAPPEFIQPPNLLDRNMMPPLPDGQRLNNMRDQVLDFIDLLYF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00150 235 MobiDBLite consensus disorder prediction 173 206 - -
Bach13g00150 235 Gene3D - 89 178 - -
Bach13g00150 235 Gene3D - 21 88 IPR036879 GO:0003677|GO:0046983
Bach13g00150 235 PRINTS MADS domain signature 30 45 IPR002100 GO:0003677|GO:0046983
Bach13g00150 235 PRINTS MADS domain signature 45 66 IPR002100 GO:0003677|GO:0046983
Bach13g00150 235 PRINTS MADS domain signature 10 30 IPR002100 GO:0003677|GO:0046983
Bach13g00150 235 SMART madsneu2 8 67 IPR002100 GO:0003677|GO:0046983
Bach13g00150 235 FunFam Agamous-like MADS-box protein AGL62 20 86 - -
Bach13g00150 235 MobiDBLite consensus disorder prediction 173 193 - -
Bach13g00150 235 ProSiteProfiles MADS-box domain profile. 8 68 IPR002100 GO:0003677|GO:0046983
Bach13g00150 235 SUPERFAMILY SRF-like 9 90 IPR036879 GO:0003677|GO:0046983
Bach13g00150 235 Coils Coil 99 126 - -
Bach13g00150 235 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 17 64 IPR002100 GO:0003677|GO:0046983
Bach13g00150 235 PANTHER MADS BOX PROTEIN 10 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00150 Bach-Chr13 4386088 4386795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00150 4 188 Type I MADS-box Gene Family AT5G60440 43.229 1.50e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bach13g00150 SRF-TF 2.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00150 - - cit:102622898 192.586