Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00148 ATGGGACGTGTCCGAACAAAGACTGTGAAGAAGTCTTCGCGCCAAGTCATAGAGCGCTACTACTCGCGCATGACCCTGGATTTCCACACCAACAAGAAGATTCTCGAAGAAGTTGCTATCATTCCCTCCAAGAGGCTCCGCAACAAGATCGCTGGCTTCTCCACCCATCTCATGAAGCGCATCCAGAAAGGTTCCGTTCGCGGTATCTCCCTGAAGTTGCAGGAGGAGGAGCGCGAGCGCCGCATGGACTTCGTTCCCGACGTTTCTGCCATCAAAACCGACAACATTGAAGTCGACAAGGAGACCCTGGATATGCTCAATGCTCTCGGAATGAACGAGATTCCTGGTCTTGTTCAGGTCGATCCTACTGCGCAGCCGCAGCAGACCTTTGGATTTGGTAGGCCTAGGAGGTACTGA 417 0.53 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGSVRGISLKLQEEERERRMDFVPDVSAIKTDNIEVDKETLDMLNALGMNEIPGLVQVDPTAQPQQTFGFGRPRRY 138
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00148 138 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Bach13g00148 138 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bach13g00148 138 PANTHER 40S RIBOSOMAL PROTEIN S17 1 126 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bach13g00148 138 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bach13g00148 138 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Bach13g00148 138 FunFam 40S ribosomal protein S17 1 62 - -
Bach13g00148 138 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bach13g00148 Bach-Chr13 4275571 4275987 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00148 1 138 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 82.270 3.80e-79 228
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00148 K02962 - csv:101204345 240.35