Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00146 ATGACCCTGGATTTCCACACCAACAAGAAGATTCTCGAAGAAGTTGCCATCATTCCCTCCAAGAGGCTCCGCAACAAGATCGCTGGCTTCTCCACCCATCTCATGAAGCGCATCCAGAAGGGTTCCGTTCGCGGTATCTCCCTTAAGTTGCAGGAGGAGGAGCGCGAGCGCCGCATGGACTTCGTTCCCGACGTTTCCGCCATCAAAACCGACAACATTGAAGTCGACAAGGAGACCCTGGACATGCTCAACGCTCTCGGAATGAACGAGATTCCTGGCCTGGTTCAGGTTGATCCTACTGCTGTGCAGCCGCAGCAGTCCTTCGGTTTTGGTAGGCCCCGGAGGTACTGA 351 0.5499 MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGSVRGISLKLQEEERERRMDFVPDVSAIKTDNIEVDKETLDMLNALGMNEIPGLVQVDPTAVQPQQSFGFGRPRRY 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00146 116 Gene3D - 1 39 IPR036401 GO:0003735|GO:0005840|GO:0006412
Bach13g00146 116 Pfam Ribosomal S17 1 97 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bach13g00146 116 ProSitePatterns Ribosomal protein S17e signature. 18 33 IPR018273 GO:0003735|GO:0005840|GO:0006412
Bach13g00146 116 PANTHER 40S RIBOSOMAL PROTEIN S17 1 104 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bach13g00146 116 SUPERFAMILY Rps17e-like 2 39 IPR036401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00146 Bach-Chr13 4260903 4261253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00146 1 116 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 80.508 1.67e-63 187