Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00142 ATGGATTCCAATCTGGACCGTGAATATTCATCTTGGCTTCAGCTTTTCTCTCCTTCCATAGCTTCTGCGATCAGAAGGATTGATGAGTTATCGGTAACCATGACGAGGATAACAGGGATGCTGTTGATGACAGTAGCTGTGGTTCATTTTTTAAAACCTAATTCTGTAAGGAGTGCTTTTGTTTTTGCCATATTCATAACTGGGTGCTTTTGTGGAGTTTTAGCCATTTTATCTCAGTCTTATCAAGCACTATGGCGGTTTCAATTTCAATTGGAAAGAACAAGGATTGCTCTGCCGCCACTTAAAATCTTCAAGGCCAATAGCAGCAGTATTGAGGAAGAAACGACAGGATCCAAAGATGGGTGTGTCGTTTGCTTGGAAGAATTCAAGAACGGGGAGTTAGTTCAAGCTTTTCCTATGTGCAACCATGAGTTCCATGCACCCTGCATCAATACTTGGTTGAATGGTGGAAAAACTACTTGTCCTATCTGTCGTTTTTCTCTGCAGGAAATAGTGATTGTAGAAAGAATAGTTTTATAA 540 0.4037 MDSNLDREYSSWLQLFSPSIASAIRRIDELSVTMTRITGMLLMTVAVVHFLKPNSVRSAFVFAIFITGCFCGVLAILSQSYQALWRFQFQLERTRIALPPLKIFKANSSSIEEETTGSKDGCVVCLEEFKNGELVQAFPMCNHEFHAPCINTWLNGGKTTCPICRFSLQEIVIVERIVL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00142 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 173 IPR013083 -
Bach13g00142 179 Pfam Ring finger domain 122 165 IPR001841 -
Bach13g00142 179 PANTHER OS11G0150450 PROTEIN 87 172 - -
Bach13g00142 179 SUPERFAMILY RING/U-box 110 171 - -
Bach13g00142 179 SMART ring_2 122 164 IPR001841 -
Bach13g00142 179 ProSiteProfiles Zinc finger RING-type profile. 122 165 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00142 Bach-Chr13 4228127 4228666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00142 122 168 C3H Transcription Factor Family AT3G10910 51.064 2.47e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00142 - K19041 aprc:113865236 90.8929