Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00136 ATGGAGCATGGTGAAAGGTCACCACAGTTCAACAATACTGCAATGGCTGCGGGGTGTATTGCTTCCTTACTAGTCTTGCCGTCTGCAGAAATCTTTGAAGGTAGAGAAAGCAATGATCAAACCACAGGATCGAATGATGAGTGTGCTATTTGCTTGGAAGATTTCAAGAATGGTGATTGGGTCCAACCTTTTCCCAAGTGCAGCCATGTGTTCCATTCGACTTGTATTAATACTTGGTTGCTAGAGGGAAAATTTACTTGCCCCAATTGTCGTTTTTCTCTGCAAGATTTAGGTGTTTGA 300 0.4267 MEHGERSPQFNNTAMAAGCIASLLVLPSAEIFEGRESNDQTTGSNDECAICLEDFKNGDWVQPFPKCSHVFHSTCINTWLLEGKFTCPNCRFSLQDLGV 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00136 99 ProSiteProfiles Zinc finger RING-type profile. 48 91 IPR001841 -
Bach13g00136 99 SMART ring_2 48 90 IPR001841 -
Bach13g00136 99 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Bach13g00136 99 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 27 94 - -
Bach13g00136 99 Pfam Ring finger domain 46 91 IPR001841 -
Bach13g00136 99 SUPERFAMILY RING/U-box 42 95 - -
Bach13g00136 99 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 97 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00136 Bach-Chr13 4028055 4028354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00136 47 94 C3H Transcription Factor Family AT3G10910 56.250 7.43e-14 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00136 - K10664 aprc:113865236 78.5666