Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00123 ATGGCATCTTGTAACGGTGGAGTGCCACCGGGGTTTCGGTTTCATCCCACAGATGAAGAGCTCCTTCATCACTACTTGAAGAAGAAGATCTCCTTTCAGAAGTTTGACATGGAGGTGATTAGAGAGGTGGACTTGAACAGGATAGAGCCTTGGGAGTTGCAAGAAAGATGCAAGATTGGATCAACCCCACAAAACGAATGGTACTTATTCAGTCATAAGGACAGGAAGTATCCAACAGGATCAAGGACAAACAGAGCCACAAATGCAGGGTTTTGGAAAGCAACAGGGAGAGACAAGTGCATCAGGAACAACTATAAGAAGATTGGAATGAGGAAAACACTTGTGTTTTACAGAGGCAGAGCTCCTCATGGCCACAAAACTAATTGGATCATGCATGAGTATCGCCTTGAAGATGGCGATGACATAGATCCCAACGAAGATGGCTGGGTGATCTGCAAAGTTTTCAAGAAGAAAGACTTATTCAAGCTGGGAAATGAAGGTGGCTCCACACGTAACTCAGATCAACAACTCCATAACTCCTCAAATACCAATCAACCTCGCTCCTTCATTCACAGAGAAAACCACTACTTACTACCAAACCCTAGGAACCCATCTGGATTTGAACTTGATAAACCAGAGCTTGCTTTGAATTATCCCCACTTGCAAAACCCTCAATACTCACTCTTCCAAGCTCAACCTCTCCTTCCAACACACAAACCCATTGTTTATGACTACTCATCATATGCATCAACCCTACCTTTAGACTCACCTGCCATGGCGAAGCAGCTCATGACAAACCCTAGAGACTGCGAAAGCGGCAGCGAGGGCTTGAGGTACCAAGTTTCAGAGGCTGGCATGGAAGTTGGCACGTGTGAAGCAGCACAAGAGATGGGAACAGGAAGAGAAGGAGGAATGAATCAATGGGGTGTGCTTGATAGGATTGTTACTTCTCATCTTGGAAATGAAGACTCCTCAAAAGGGGTTAGGTTTGAGGATGCAAATGCACAATCTGTACCCCAAATCAACCAGCTCTCGTTGCGTGGAGAGATGGACTTTTGGGCATATGGAAAGCAGTGA 1077 0.454 MASCNGGVPPGFRFHPTDEELLHHYLKKKISFQKFDMEVIREVDLNRIEPWELQERCKIGSTPQNEWYLFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNNYKKIGMRKTLVFYRGRAPHGHKTNWIMHEYRLEDGDDIDPNEDGWVICKVFKKKDLFKLGNEGGSTRNSDQQLHNSSNTNQPRSFIHRENHYLLPNPRNPSGFELDKPELALNYPHLQNPQYSLFQAQPLLPTHKPIVYDYSSYASTLPLDSPAMAKQLMTNPRDCESGSEGLRYQVSEAGMEVGTCEAAQEMGTGREGGMNQWGVLDRIVTSHLGNEDSSKGVRFEDANAQSVPQINQLSLRGEMDFWAYGKQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00123 358 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 222 - -
Bach13g00123 358 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Bach13g00123 358 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Bach13g00123 358 MobiDBLite consensus disorder prediction 166 188 - -
Bach13g00123 358 FunFam Nac domain-containing protein 86 17 160 - -
Bach13g00123 358 SUPERFAMILY NAC domain 7 157 IPR036093 GO:0003677|GO:0006355
Bach13g00123 358 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00123 Bach-Chr13 3700361 3703193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00123 1 352 NAC Transcription Factor Family AT1G33280 56.983 4.33e-127 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach13g00123 NAM 1.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00123 - - gmx:100804181 603.979