Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00117 ATGACTCCAGCTAATTTGGCATCACAGTTTGGTGACACCACATATACCAAGGTGTTTGTTGGAGGGTTGGCTTGGGAGACTCAGAAAGAGACCATGAAGAAGTATTTTGAACAGTTTGGTGAGATCTTGGAGGCTGTTGTCATCACTGACAAAGCCACAGGAAGATCTAAAGGCTATGGATTTGTAACTTTTCGCGAACCAGAAGCAGCCATGAGAGCTTGTGTTGATGCTGCTCCTGTAATAGATGGTAGGAGGGCTAATTGTAACCTTGCTTCTTTGGGTGTTCAGAGATCTAAGCCTTCAACCCCAAAGCATGGAGGAGGAGGGAGGAACTTTAGAGCAATGGGTTCTTTCCAGACAGGGTTTGGAGGAGGAATGGGAACAGCTTTTCCTTCAGCAGCAACCTTCCCTCATTGTGCCATCCAACAAGGGATACCCTATAATGTTTATGGGTACTCTCCATACTCGCCAGACTATACTTACCCTACGAGCTACTATAGTGTGTATGGAGCAGGAGCAACAGCTCAGTACCCACTGTATGGAACCGGACCAGCAGGGATGATTAATGGGGCTGCAGCCACAGCATTTTACCCATATCTACAGTTCGGGGAGGGGAGCGGTGCTGCCACTGGCGGGTATTCTTCCGGACAGGGTTACGGCGTCAACTACCCTCCACAGCTCTTTCAGTATCCTCCCATCAGCTCCACTGCAGGGTACGCACAGCACTATGGCGCACCCATGTCTCTTGCACCTTCGCCTGCCTTGCAATCAGTGTGCTTCGCTGTTCCGCAGGCGTGACCATGGCTCTTCAAGCTCCAATTCCACATCGCTAGAGATTATGATCATTCTCAAACTAGCTATGCCAAAACTTCCAAGTGCTTGAAGTCTCATCATTTATCCTTTGGCTTAACCATGGTGCTCTCTTTCACACACGCACTCTTTCACTAACACATAAAAGAAAGTCCATAAATGGCATTTGGACTTTTGCACACATAAAGAGGCTCCCCATAGGAGCCGAAAAGTCCCTCCAAATTTGGAGAATCATGCATTTTCCCCCCACTTTGCATATTTTTGAATGAAAAGGGTTCCATGAAGAGAACCCAGCATGTAAATGTATCATCACCAACTCAAGCTATAGGAAATAGCTAAGTTGGAAAAAGAATCCCAAAACTTAGCCTTGGAAAGGTCAAGTGAAAAGCCATCTTGTCAACTTGAGCCCCGGCAGGGCTGAGTGAAAGTAAAAAATGGTTTCAGAAACTGTACATTGGATATCGCAGTTAGGTAGGGCATCAATTAGGTCATAGTTTTGCAAATAGTTAATTCCCTCCAATCATCTTTGCTAATCACACCCCTCAGGAAGAAAGGGGCATTTTTAGCGAAAAAAATGGGCATTGGATGTCCAATCTTTTTTGTAAGGTAACGTGTAGCTGGTCTTACGGTTTTAGTATTAGGACAAATCATGTTTTTATAAATGCTTTTTACCAACTTTCACATAATGGGTTTAACCAACCAACCAAATAACCAATCATCTTCCCTAAGGGTTAAGGGGAGGCAATCACTAACTTGTGTTTGTTTCTTGTAAATTCATTAATTAATTGTGGCTAAACTATGGGAGTTTAAGCCCAATTTTACTAATTTTTAGGAGGGGTAGTGTTTCTTTTTATAGTACTTTAGCTGCTCTAGTACACATTTCATCATCATATTGAGAACTACATCAATGGATGTGGAGCTCAAAGCACACTTGCATGTAACCCTGGGAGATATTTTGGTTCCCTTGGGTTCTTCACTGACCCACCAACCATGGTTAGGACTTAGGTGAATTTCATCCCTCCCATGCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 1881 0.4423 MTPANLASQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRAMGSFQTGFGGGMGTAFPSAATFPHCAIQQGIPYNVYGYSPYSPDYTYPTSYYSVYGAGATAQYPLYGTGPAGMINGAAATAFYPYLQFGEGSGAATGGYSSGQGYGVNYPPQLFQYPPISSTAGYAQHYGAPMSLAPSPALQSGVTMALQAPIPHR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00117 270 Gene3D - 7 129 IPR012677 -
Bach13g00117 270 SMART rrm1_1 17 89 IPR000504 GO:0003723
Bach13g00117 270 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 10 97 - -
Bach13g00117 270 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 100 IPR000504 GO:0003723
Bach13g00117 270 SUPERFAMILY RNA-binding domain, RBD 11 113 IPR035979 GO:0003676
Bach13g00117 270 PANTHER BOULE-RELATED 5 256 - -
Bach13g00117 270 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 73 IPR000504 GO:0003723
Bach13g00117 270 CDD RRM_RBM24_RBM38_like 16 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00117 Bach-Chr13 3529812 3535339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00117 1 92 C2H2 Transcription Factor Family AT2G19380 41.304 9.90e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00117 - - jre:108998860 447.588