Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00114 ATGTCTCAAGATAGTTCTGCATCGTCGAGTTGTTGCTCGAGATCAGATCATCCAGATGTAGCTTCAGCTGAACTGAAGCTGTACCGAGCCTTCATCTTCTCGGTACCCATCTTCTTTACTTTCATTCTTCTGTTTTTGTTCTATGTGTTCTATCTTCGGCCACGAAGGGTGGATTGGGCGTCTCTCAGAATGAGAGCATTTACAGAGGACAGTAATGATATCTCTAGGCCTTCTGAATCGGGCTTGAACAAAGAACTCAGAGAGATGCTGCCAGTGATTATATACAAGGAAAGCTTCTCTGTTAAAGATACACAATGCTCAGTATGCCTTTTGGACTACCAACCAGAAGATCGGCTTCAACAGATACCTGCATGCGGCCATACGTTTCACATGAACTGCATAGATCTTTGGCTTGCCAACCACAGAACCTGCCCTCTCTGCCGCTTGTCTCTATCAGCTAAATCTTCAGAGATGCCTAATATACAGGAGATTCATCATGATTCAAATGATGAAGAAACATCAAACATTCAAGCCTCTGAATTAAGACCAACAACGCATCCAGATATCAAAATTCAGCAGAATTGCTCTGGTGAAGCTGAAAGCAGTGCAAACTGCACTGATCTTGAAATTGGAAATACAAGGGAACAATTACGAGAAGCCTGA 663 0.4299 MSQDSSASSSCCSRSDHPDVASAELKLYRAFIFSVPIFFTFILLFLFYVFYLRPRRVDWASLRMRAFTEDSNDISRPSESGLNKELREMLPVIIYKESFSVKDTQCSVCLLDYQPEDRLQQIPACGHTFHMNCIDLWLANHRTCPLCRLSLSAKSSEMPNIQEIHHDSNDEETSNIQASELRPTTHPDIKIQQNCSGEAESSANCTDLEIGNTREQLREA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00114 220 SUPERFAMILY RING/U-box 90 159 - -
Bach13g00114 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 155 IPR013083 -
Bach13g00114 220 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Bach13g00114 220 Pfam Ring finger domain 105 148 IPR001841 -
Bach13g00114 220 FunFam RING-H2 finger protein ATL7 71 153 - -
Bach13g00114 220 MobiDBLite consensus disorder prediction 197 220 - -
Bach13g00114 220 CDD RING-H2_EL5-like 105 148 - -
Bach13g00114 220 SMART ring_2 106 147 IPR001841 -
Bach13g00114 220 MobiDBLite consensus disorder prediction 197 211 - -
Bach13g00114 220 PANTHER OS11G0150450 PROTEIN 39 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00114 Bach-Chr13 3401416 3406883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00114 22 216 C3H Transcription Factor Family AT4G10150 52.000 7.99e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00114 K19039 - qsa:O6P43_001690 240.736