Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00108 CTTTTTTCTGCTCCTTCTATCTATCTATCCATCGAGGCTGCGTAGGGTGTTAAAACCTCTTGCTGCTGTAGGAAGACTCCTCTTCTCTGTAAACATATATATAACATAAACGTAATTATTCTTCCAAATTCCACACTTATGGTTACGAGTTAGGAGGAGGAAAAATCGAACCAATTCACTTCCTTTCCAGACTCTTGCCTCTGATTTCTGATCCCTCTTGCCCTAGATTGATTCAACCTCTCCCTTTTATATCACCTGCCACTTATCCCCACCGTCTTACAATCGATCGGTCCTAAGGTTCTATCAATTCCCTTTTAGGGTTTGCGCCATGGACTCCGAGGATGATATGCACGACGCCAACGATATTGAGTCCCTTGATGACGATTTCTACAGCGGCGAGACCGAGGATGCTCCCATGGATTATTACAGCGACTACGATGATGGGCCAGATGATTACTTTGATGATGCTGATGATTCCGACAGGATTGAATCTCGTCGTCCTGAGCAAAACTTTACGATCTTGAAGGAGTCAGATATCCAGCAAATGCAGGAAGATGATATCACCAGAGTAGCAACAGTTCTTTCCATATCACGGGTTGCTGCGAGTGTCTTACTTCGTCATTACAATTGGAGCGTTAGTAAAGTGCATGATGCATGGTTTGCTGATGAAGATCGAGTCAGAAAATCAGTTGGCTTGTTGGAGAAGCCAGTTGTGCAGCTTCCTAATGCTAGAGAGCTGACCTGCGGCATCTGTTTTGAAAGTTATCCACGTACACGGATTGAATCTGCTGCTTGCGGCCATCCATATTGTATTTCATGCTGGGCAGGTTATATTAGCACATCCATTAATGATGGTCCTGGATGTTTAATGCTGAGATGTCCTGATCCCACTTGTGGTGCCACTGTTGGTCAAGATATGATTAATCTATTATCATCGGATGAGTATAAGGAGAAGTATGCCCGTTACCTTCTGCGGTCTTATGTTGAAGACAATAAGAAGACCAAGTGGTGTCCTGCTCCAGGTTGTGAATATGCTGTCACTTTTGATGCTGGCAGTGGAAATTATGATGTTTCATGCCTCTGTTCATATGGCTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCCAGTGGACTGTGGCACTGTCGCTAAGTGGATTTTGAAGAACAGTGCAGAATCTGAAAATATGAACTGGATACTTGCTAACTCAAAGCCATGTCCCAAGTGCAAGCGACCAATCGAAAAAAACCAGGGTTGCATGCACATGACTTGTACTCCACCTTGTAAATTTGAATTTTGCTGGTTATGCCTTGGTGCATGGTCAGACCATGGTGAAAGGACTGGTGGTTTCTATGCTTGCAACCGTTACGAGGCTGCTAAACAAGAAGGAGTGTATGATGATGCTGAAAGAAGAAGAGAAATGGCAAAGAATTCCTTGGAGAGATACACTCATTATTATGAGCGGTGGGCCAGTAATCAATCTTCGAGGCAAAAAGCTCTTGCAGATCTACTTCAGATGCAGACTGTGCATATCGAGAAGCTTAGCGACACACAGTGTCAACCTGAGTCACAGCTCAAGTTCATAACTGAAGCCTGGCTACAGATAGTTGAATGCAGGCGCGTTCTGAAGTGGACATATGCGTATGGGTTCTATTTACCGGAGCATGAGCATGCTAAGAAACAATTCTTTGAGTACTTGCAAGGTGAGGCAGAATCGGGTTTGGAGAGACTTCATCAATGTGCTGAGAAGGAATTACAACAGTACCTCAATGCTGATGGTCCATCTAGAGAATTCAACGACTTTCGCACAAAGCTAGCTGGATTGACCAGTGTGACTAGGAACTACTTCGAGAATTTGGTCAGGGCGTTAGAGAACGGTTTAGCTGATGTTGATTGCAATGGGGCAGCCTCCAGCAAAGCTACAACCTCAAAAAATGCTGCAGGGAGCAGCAAGGGACGAGGAGGAAGAGGAAAGGGAACTACCCGAAGCAGCAGTTCCAACAGAATGACTGATGATAATTATTGGTCTTGTGAACATTGTACCTATGCTAATGCAAAATCTGCGACCACATGCACGATGTGCCAGCAACAGCGTCGGTGA 2101 0.4474 MDSEDDMHDANDIESLDDDFYSGETEDAPMDYYSDYDDGPDDYFDDADDSDRIESRRPEQNFTILKESDIQQMQEDDITRVATVLSISRVAASVLLRHYNWSVSKVHDAWFADEDRVRKSVGLLEKPVVQLPNARELTCGICFESYPRTRIESAACGHPYCISCWAGYISTSINDGPGCLMLRCPDPTCGATVGQDMINLLSSDEYKEKYARYLLRSYVEDNKKTKWCPAPGCEYAVTFDAGSGNYDVSCLCSYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDDAERRREMAKNSLERYTHYYERWASNQSSRQKALADLLQMQTVHIEKLSDTQCQPESQLKFITEAWLQIVECRRVLKWTYAYGFYLPEHEHAKKQFFEYLQGEAESGLERLHQCAEKELQQYLNADGPSREFNDFRTKLAGLTSVTRNYFENLVRALENGLADVDCNGAASSKATTSKNAAGSSKGRGGRGKGTTRSSSSNRMTDDNYWSCEHCTYANAKSATTCTMCQQQRR 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00108 590 Gene3D - 560 590 - -
Bach13g00108 590 SUPERFAMILY RING/U-box 208 277 - -
Bach13g00108 590 Pfam Ariadne domain 357 520 IPR045840 -
Bach13g00108 590 ProSitePatterns Zinc finger RanBP2-type signature. 566 585 IPR001876 -
Bach13g00108 590 SMART zf_4 564 588 IPR001876 -
Bach13g00108 590 ProSiteProfiles Zinc finger RING-type profile. 139 183 IPR001841 -
Bach13g00108 590 CDD Rcat_RBR_ARI7-like 293 347 - -
Bach13g00108 590 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 222 IPR013083 -
Bach13g00108 590 ProSiteProfiles TRIAD supradomain profile. 135 348 IPR044066 -
Bach13g00108 590 MobiDBLite consensus disorder prediction 1 48 - -
Bach13g00108 590 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 69 436 IPR031127 GO:0004842|GO:0016567
Bach13g00108 590 MobiDBLite consensus disorder prediction 527 559 - -
Bach13g00108 590 SUPERFAMILY RING/U-box 289 337 - -
Bach13g00108 590 ProSiteProfiles Zinc finger RanBP2 type profile. 562 590 IPR001876 -
Bach13g00108 590 SUPERFAMILY RING/U-box 135 217 - -
Bach13g00108 590 FunFam RBR-type E3 ubiquitin transferase 133 222 - -
Bach13g00108 590 Pfam IBR domain, a half RING-finger domain 208 270 IPR002867 GO:0008270
Bach13g00108 590 Pfam IBR domain, a half RING-finger domain 287 335 IPR002867 GO:0008270
Bach13g00108 590 CDD BRcat_RBR_ANKIB1 215 279 - -
Bach13g00108 590 SUPERFAMILY Ran binding protein zinc finger-like 562 589 IPR036443 -
Bach13g00108 590 FunFam RBR-type E3 ubiquitin transferase 271 521 - -
Bach13g00108 590 MobiDBLite consensus disorder prediction 1 51 - -
Bach13g00108 590 CDD RING-HC_ARI6-like 136 197 - -
Bach13g00108 590 Gene3D - 266 521 - -
Bach13g00108 590 SMART ibrneu5 274 344 IPR002867 GO:0008270
Bach13g00108 590 SMART ibrneu5 208 270 IPR002867 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00108 Bach-Chr13 3298384 3305451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00108 17 589 ARIADNE family AT1G65430 69.692 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00108 K11968 - gmx:100810427 1086.25