Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00099 ATGGAAGAACCCACCACCATGCAAGATTCCGTTGCTTCTCCAGCATCGTATCACGGAGTCCGCAAGCGAAAATGGGGTAAATGGGTGTCTGAAATTCGCGAGCCCGGCAAGAAAACCCGAATATGGTTAGGGAGCTATGAGGCTCCGGAAATGGCCGCAGCAGCTTATGATGTCGCGGCTCTGCATCTTCGGGGCCACGCGGCAAAGCTTAATTTTCCCGAATTGGCTGAGAGCTTACCACGGCCGGCGAGCTCCAGAGCAGAGGACGTGCAATTGGCCGCTCAACAAGCAGCATTAAGTTTCAGGAGACCAGTACAAGGATCACCGGAAACAGGCGGCCCTAAGGGAAGTTTGGTTCCGGTGACGGTGGGGCTGTCACCGAGCCAAATTCAGGCCATTAATGAGTCACCATTGGATTCACCGAAGATGTGGACGCAAATGGCTGAGGCTCTCATGTTGGGGGTTGATGAGCCTGTGGTATTGCACGATGAATTTAATTACTTCCCTGAATGGGAGGGAATAGAACATGATTCCTTATGGGACCCCTAA 549 0.5264 MEEPTTMQDSVASPASYHGVRKRKWGKWVSEIREPGKKTRIWLGSYEAPEMAAAAYDVAALHLRGHAAKLNFPELAESLPRPASSRAEDVQLAAQQAALSFRRPVQGSPETGGPKGSLVPVTVGLSPSQIQAINESPLDSPKMWTQMAEALMLGVDEPVVLHDEFNYFPEWEGIEHDSLWDP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00099 182 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Bach13g00099 182 SUPERFAMILY DNA-binding domain 17 74 IPR016177 GO:0003677
Bach13g00099 182 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Bach13g00099 182 PRINTS Ethylene responsive element binding protein signature 55 75 IPR001471 GO:0003700|GO:0006355
Bach13g00099 182 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Bach13g00099 182 FunFam Ethylene-responsive transcription factor 2 15 74 - -
Bach13g00099 182 CDD AP2 17 75 IPR001471 GO:0003700|GO:0006355
Bach13g00099 182 Gene3D AP2/ERF domain 16 74 IPR036955 GO:0003700|GO:0006355
Bach13g00099 182 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Bach13g00099 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00099 Bach-Chr13 3165942 3166490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00099 8 182 AP2-EREBP Transcription Factor Family AT1G71450 48.603 2.93e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach13g00099 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00099 - - jre:108998823 229.95