Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00098 ATGCCTTCTAGCAGTAACAGTAAGCACGGTGCTGCCTCTTCTGCCTATCGAGGTGTGCGCAAGAGGAAATGGGGCAAATGGGTTTCTGAAATCCGTGAGCCTGGAAAGAAGACCAGAATTTGGTTGGGAAGCTTCGAGACGCCGGAGATGGCCGCAGCAGCCTATGATGTCGCCGCGTTGCATTTTCGGGGACGTGATGCCAGGCTTAACTTCCCTGAACTGGCCAACAACCACCCCCGTCCAGCAAGTAATAATGCTGACGACATACGCATGGCAGCGCACGATGCTGCTCTGAGGCTTAGGAATAATAACATGGATGCGGCGGAGGGTGGCGGAGCCTCCGGGTCCAACGTGGCACCGGTCACCGTGAGGCTGTCACCGAGCCAAATTCAGGCCATCAACGAGTCACCACTGGACTCACCCAAGATGTGGATGCAAATGGCAGAAGTGGACATGCTTATGTACGAGAACGAGTCCATGACGTTTGCGAATGAGTTCGAGGAGAATGAATGGAAGGATATGCAAAATGATTCTCTTTGGGACCCTTAA 549 0.5337 MPSSSNSKHGAASSAYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAALHFRGRDARLNFPELANNHPRPASNNADDIRMAAHDAALRLRNNNMDAAEGGGASGSNVAPVTVRLSPSQIQAINESPLDSPKMWMQMAEVDMLMYENESMTFANEFEENEWKDMQNDSLWDP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00098 182 FunFam Ethylene-responsive transcription factor 2 14 73 - -
Bach13g00098 182 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
Bach13g00098 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 156 - -
Bach13g00098 182 Gene3D AP2/ERF domain 15 73 IPR036955 GO:0003700|GO:0006355
Bach13g00098 182 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Bach13g00098 182 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
Bach13g00098 182 Pfam AP2 domain 15 64 IPR001471 GO:0003700|GO:0006355
Bach13g00098 182 CDD AP2 14 74 IPR001471 GO:0003700|GO:0006355
Bach13g00098 182 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Bach13g00098 182 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00098 Bach-Chr13 3113413 3113961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00098 14 182 AP2-EREBP Transcription Factor Family AT1G71450 62.353 2.14e-69 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach13g00098 AP2 2.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00098 - - qsa:O6P43_030074 280.026