Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00090 ATGAGTCATAACTCAAGCGAGAATGAAGCAAGCTCGAGTGAGAAGAAATACAAGGGAGTTCGTCGTCGGAAATGGGGCAAGTGGGTATCGGAGATTCGTGTACCGGGCACTCAAGAGCGTCTTTGGTTAGGTACATATGCGACTCCAGAAGCTGCAGCTGTGGCTCACGACGTAGCGTTCTTTTGCCTGAGGAGACCAGAAACACTGGACAAGCTCCATTTTCCAGACATGTTGTCATCTTACGTTGTTCAGAGAGCTGTCTCTCCGAGGTCGGTACAGAAGGCAGCATCGGATGCTGGCATGGCCGTTGATGCTAACCACATTTTGAGAAACACAGGGAACACAGAAACATCTGTTGGGATGCAGCAGGAAAATGATGCATACAGCAGAGAGTACAATAATGGGCAAGCTCAGAATGATGGGTTTCGGTGGGAAAAAGTGGGTGAAGATGAGGGGAGAGTGACATGGGAAGATCATGAGGAAGCTTTGACCATTTCCATTGATGATTATCTTTAG 516 0.4806 MSHNSSENEASSSEKKYKGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVAFFCLRRPETLDKLHFPDMLSSYVVQRAVSPRSVQKAASDAGMAVDANHILRNTGNTETSVGMQQENDAYSREYNNGQAQNDGFRWEKVGEDEGRVTWEDHEEALTISIDDYL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00090 171 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Bach13g00090 171 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Bach13g00090 171 ProSiteProfiles AP2/ERF domain profile. 16 75 IPR001471 GO:0003700|GO:0006355
Bach13g00090 171 CDD AP2 15 76 IPR001471 GO:0003700|GO:0006355
Bach13g00090 171 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 125 - -
Bach13g00090 171 MobiDBLite consensus disorder prediction 1 22 - -
Bach13g00090 171 SMART rav1_2 16 81 IPR001471 GO:0003700|GO:0006355
Bach13g00090 171 Gene3D AP2/ERF domain 15 76 IPR036955 GO:0003700|GO:0006355
Bach13g00090 171 SUPERFAMILY DNA-binding domain 16 68 IPR016177 GO:0003677
Bach13g00090 171 Pfam AP2 domain 16 65 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00090 Bach-Chr13 2962369 2962884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00090 13 115 AP2-EREBP Transcription Factor Family AT1G22810 62.136 3.73e-45 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach13g00090 AP2 1.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00090 - - gmx:100803550 180.259