Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach13g00090 | ATGAGTCATAACTCAAGCGAGAATGAAGCAAGCTCGAGTGAGAAGAAATACAAGGGAGTTCGTCGTCGGAAATGGGGCAAGTGGGTATCGGAGATTCGTGTACCGGGCACTCAAGAGCGTCTTTGGTTAGGTACATATGCGACTCCAGAAGCTGCAGCTGTGGCTCACGACGTAGCGTTCTTTTGCCTGAGGAGACCAGAAACACTGGACAAGCTCCATTTTCCAGACATGTTGTCATCTTACGTTGTTCAGAGAGCTGTCTCTCCGAGGTCGGTACAGAAGGCAGCATCGGATGCTGGCATGGCCGTTGATGCTAACCACATTTTGAGAAACACAGGGAACACAGAAACATCTGTTGGGATGCAGCAGGAAAATGATGCATACAGCAGAGAGTACAATAATGGGCAAGCTCAGAATGATGGGTTTCGGTGGGAAAAAGTGGGTGAAGATGAGGGGAGAGTGACATGGGAAGATCATGAGGAAGCTTTGACCATTTCCATTGATGATTATCTTTAG | 516 | 0.4806 | MSHNSSENEASSSEKKYKGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVAFFCLRRPETLDKLHFPDMLSSYVVQRAVSPRSVQKAASDAGMAVDANHILRNTGNTETSVGMQQENDAYSREYNNGQAQNDGFRWEKVGEDEGRVTWEDHEEALTISIDDYL | 171 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach13g00090 | 171 | PRINTS | Ethylene responsive element binding protein signature | 39 | 55 | IPR001471 | GO:0003700|GO:0006355 | |
Bach13g00090 | 171 | PRINTS | Ethylene responsive element binding protein signature | 17 | 28 | IPR001471 | GO:0003700|GO:0006355 | |
Bach13g00090 | 171 | ProSiteProfiles | AP2/ERF domain profile. | 16 | 75 | IPR001471 | GO:0003700|GO:0006355 | |
Bach13g00090 | 171 | CDD | AP2 | 15 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Bach13g00090 | 171 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 6 | 125 | - | - | |
Bach13g00090 | 171 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bach13g00090 | 171 | SMART | rav1_2 | 16 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Bach13g00090 | 171 | Gene3D | AP2/ERF domain | 15 | 76 | IPR036955 | GO:0003700|GO:0006355 | |
Bach13g00090 | 171 | SUPERFAMILY | DNA-binding domain | 16 | 68 | IPR016177 | GO:0003677 | |
Bach13g00090 | 171 | Pfam | AP2 domain | 16 | 65 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach13g00090 | Bach-Chr13 | 2962369 | 2962884 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach13g00090 | 13 | 115 | AP2-EREBP Transcription Factor Family | AT1G22810 | 62.136 | 3.73e-45 | 144 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Bach13g00090 | AP2 | 1.4e-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach13g00090 | - | - | gmx:100803550 | 180.259 |