Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00058 ATGGGACGTTCCCCTTGTTGTGAGAAAGCTCACACCAACAAAGGTGCTTGGACCAAAGAAGAAGACCAACGCCTTATTGATTACATACGCGTCCATGGCGAAGGTTGCTGGCGTTCTCTCCCCAAAGCTGCTGGATTGCTTAGATGCGGTAAGAGTTGCAGATTGAGGTGGATAAACTACCTCCGTCCTGACCTCAAACGTGGGAATTTCACTGAAGAGGAAGATAAATTAATCATCAAACTCCACAGTTTACTTGGAAACAAATGGTCTCTGATTGCGGGTCGATTACCTGGTAGAACCGATAACGAGATCAAGAACTACTGGAATACTCACATCAAGCGCAAGCTCATAAGCAGCGGAATTGACCCACAAACTCACCATCCTCTCAATGAAACCGCCGCAGCCGCATCCACCGCCGTTGCTCCTACCAATCCCTCTCAATTGGTTTTCAAGGATTATTCTTTTCCAATTGCGGATATCAATCTCGTAAAACAGAGCAAGGGTAATTTCAAATGCATTAATTTTAGCACAGAATTGAAGAAACCCAAGAAAGAAACAGCTGAAGATCTGAACTATGCCAGCAGCGGCACAACCACCGAGGAAGGATCGCCATTGCAGCCAGATTTCTACGGAGGTGAGCTCAATCTTGAGCTCTCAATCGGTCTCTTCCCACATCACTCCGAGTCAACTCGCGGGAACTCGGCCGAGTCAAAACTTGAGCGACATCCTTTCCCGCTCGACGGCACGGTGTAG 753 0.4768 MGRSPCCEKAHTNKGAWTKEEDQRLIDYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDKLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLISSGIDPQTHHPLNETAAAASTAVAPTNPSQLVFKDYSFPIADINLVKQSKGNFKCINFSTELKKPKKETAEDLNYASSGTTTEEGSPLQPDFYGGELNLELSIGLFPHHSESTRGNSAESKLERHPFPLDGTV 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00058 250 Gene3D - 14 66 - -
Bach13g00058 250 SMART sant 13 63 IPR001005 -
Bach13g00058 250 SMART sant 66 114 IPR001005 -
Bach13g00058 250 CDD SANT 69 112 IPR001005 -
Bach13g00058 250 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 177 - -
Bach13g00058 250 CDD SANT 16 61 IPR001005 -
Bach13g00058 250 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach13g00058 250 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bach13g00058 250 FunFam Myb transcription factor 68 137 - -
Bach13g00058 250 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bach13g00058 250 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach13g00058 250 FunFam MYB-related transcription factor 13 66 - -
Bach13g00058 250 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach13g00058 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach13g00058 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach13g00058 250 Gene3D - 68 138 - -
Bach13g00058 250 MobiDBLite consensus disorder prediction 225 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00058 Bach-Chr13 1889499 1890487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00058 1 238 MYB Transcription Factor Family AT4G09460 60.081 1.17e-97 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach13g00058 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00058 K09422 - jre:109006329 365.925