Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00047 ATGCAACCCCCTTCTGCTGGTAGCGGTAGCGGCAGCGGCGGAGGTGAACTGAGTCGGGGTGGGCTTGCCCGGTTCCACTCAACTCCGTCGACCTGGTTTGAAGCACTTCTTAAAGAGGAGGAAGAAGAAGACCCATTGAATACAAACGAGTGCTTCACTCAGCTACTTTCTAGTAACTTGCCTGATTCATCCAGTTCGAGAAATACGTTGCCTTTTGATTCATCGGCTGATGTGAACACTTTGGAAGCTAGTTCGTCAACTAGGTTTCTTCGGCAAAGTAGTTCTCCGGCAGAGTTTCTCGGGAATTCGGTGACTGGCTCTGAAGTGTACTTCTCCAAGTATGGGTTTCCGTCCAATTATGCCGTTTCACAACATATTGATGTAACTTCTACCGGCAATCCAACTAGACAGAAAGTTGAGCATATTGCTAAAGCACCAGAGATTGAGATCGAGAAGATTTTGGAGGAGTCAGTACCTTGCAGAGTTCGGGCAAAGCGTGGCTTTGCTACACATCCACGGAGCATTGCTGAGAGGGTTCGGAGAAGTCGGATCAGTGACCGCATAAGGAAGCTACAAGAACTTGTTCCAAACATGGATAAGCAAACAAATACTGCAGATATGTTAGACGAGGCGGTAGCCTATGTCAAGTTTCTACAAAAGCAAATTGAGGAACTAACAGAACACCAGCGGAGATGTAAATGCACGGCTCATGAGTAAATTGATGCTTGTATCCCATACAGTGCTTTGCTAGCTGCTTGTGCATTATTTTATGAAGGATTAGATTTATGGTGTTCCTATGATGATCAATGGTTGTTCATGATATTTCTTCAGTTCCTCAATGATCCACCTTTGAAGATCATTTACAGCTTCTATGCCTCATGCTTCTGCAATATACAGATGTTGTGGTCCCATTATTATTTGGTTCCTCATTTCTTCTGCTTATCGGGGTATAGATGTAAAATAGCATACAATTTTTTTAGAAAAAAAAAAAAAAAACTACTTGAAGTATTACTTGCTCAGGAAGCTTATTTATTTATT 1038 0.4268 MQPPSAGSGSGSGGGELSRGGLARFHSTPSTWFEALLKEEEEEDPLNTNECFTQLLSSNLPDSSSSRNTLPFDSSADVNTLEASSSTRFLRQSSSPAEFLGNSVTGSEVYFSKYGFPSNYAVSQHIDVTSTGNPTRQKVEHIAKAPEIEIEKILEESVPCRVRAKRGFATHPRSIAERVRRSRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQIEELTEHQRRCKCTAHE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00047 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 234 IPR036638 GO:0046983
Bach13g00047 238 FunFam Transcription factor bHLH130 family 169 237 - -
Bach13g00047 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 218 IPR011598 GO:0046983
Bach13g00047 238 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 63 232 - -
Bach13g00047 238 Pfam Helix-loop-helix DNA-binding domain 173 219 IPR011598 GO:0046983
Bach13g00047 238 MobiDBLite consensus disorder prediction 39 74 - -
Bach13g00047 238 Coils Coil 208 228 - -
Bach13g00047 238 Gene3D - 169 238 IPR036638 GO:0046983
Bach13g00047 238 SMART finulus 174 224 IPR011598 GO:0046983
Bach13g00047 238 MobiDBLite consensus disorder prediction 48 74 - -
Bach13g00047 238 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00047 Bach-Chr13 1775472 1780129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00047 24 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 47.699 3.21e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach13g00047 HLH 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00047 - - cave:132189647 242.662