Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00015 ATGGCTTTTCTCTTTAACAACACCAGCTTCTGCTACCTCTTTTTTTTCTTTTACTTTCTCTCTTCTTTTCTGACCATAAATTCACTCTCAACTGTTTCCATTTCTGAAACATCGAATCAAACATTAATTTGTGCATTACAAGGTCAAAATTCTAACCAACGAGCCCATTTTCTCAACTGTACAAGCTTACCTTCTTCTGTAATTCAAATTCCTGTGAACCCCAGTACATCATTTTCTGAGATTGTTGGAGGAAATGGGTTTCTTTGCGCATTAAGACCACCATCTTCCTCTTCCGAATCAGTCATGGTGTGCTGGAGATTCTATGAAGATGATAGTAATGTTACCTATAAGCGTATATATCATGGGCCAGTTATTGAAAATCTTGATTCTTCGTACTCCCAAATTTGTGGCCTTGAAAATGGGACTAATCGCCTTGAATGTTGGCAATGGCCTAGATTCAATCAAAGCATGGATCTGAGGTTTTCTAGCATAGCAGTGGGAGAGGATTTTGTTTGTGGGTTATTGGAATCTGGAAGGATTACTTGCACGGGAAGTAGTGGCAGTGTTGTTGGCAATGAACCGAAGGGGAATTACAGAGTAATTGGTGCTGCTTCAAGGTATGCTTGTGCCATTTCGATTGACGGTAGATTGGATTGTTGGGGGAACATGTCAGGGAAAATACCACAAGGAAGGTTCAGTTCTATGGCTTTGGGAGAGGATAGAAGTTGTGCTATTGGGCTTGACAGAAAAGCTGTTTGCTGGGGTTGGGGGGCAGAGAGTAATTTCAGCATGCCACAGAGCTTGCGGGCTACCAAATTTTTGGCAATTGAAGCCAAGAAAAGTGTGTTCTGTGGAGTTTTCTATGATGATTTTTCTCTGCATTGTTGGGGTAGTGAGATTTTCAATCCAAACAACAAGGTATTTGATAATGTCCTCCCAGGTCCATGTAGGAATCAAAATCAATGTCGATGTGAAGCAATTCCTGATTCTGCAATGTACTGTGATCAGGGTGTCATTTGCAAGCCTTGTGACAATGAAACTCTTTCAGTTACTGAATCCCCATTGTCACCACCATCGCCAGCACCATTGCCAGCACCATCCCAAAATGAAAACAGTGGTTGGAGCAAGAAAATGGTGGCATTTCTAGTTGTTGGGTGTGTTGGTTCCTTTTGTTGGTTACTTATTGTGGCTTTCCTCCTTTACAAATATTGCAAGGTTAGAGTATGTCGAGTTCATGATTCTGGCCGGTTAGACGAGACCGCGGACTCAGCAAATCTACCAGAAGAGCCACAAGCTCAACCGGTGCCTGCAGTTCTAGAGAAGAGGCTAAGCCATATAATCAGCATGGGTAATGGTGGAGGCCATTTAGAGGAGTTTTCTTTGAAACTTCTCCAACAAGTTACCAACAATTTCTCAGAAGAGCACAAAATTGGGACCGGTAGCTTTGGCTCAGTGTACCATGCTACACTTGAAGATGGGAAAGAGATTGCTATAAAGAGAGCTGAAATCTCGTCCACCCCTCAATCGTATGCAATTTTAGGTGGCACCAAACGCCAAGAAGACAAAGACAATGCATTTGTCAATGAGCTTGAAGCCCTATCAAGACTCAACCACAAGAACCTTGTTCGTTTATTGGGATTCTATGAAGACAACAATGAACGAATTTTGGTCTATGATTACATGAATAATGGTAGCCTAAATGATCATCTCCAGCACCACAAGCTCCCTAACCATGATTCTCCTCTCAGGTCATGGACAGGGAGAATTAAGGTAGCTCTAGATGCAGCAAGAGGCATAGAATACCTTCACGAATATGCAACTCCACCAATCATTCATCGTGATATTAAGTCGGCAAATATATTACTGGACGCCAAATTTACAGCAAAAGTGTGTGATTTTGGCTTATCACTAATGGGTCCAGAAGATGAAGAGTCACATCTTTCACTCCATGCAGCTGGCACATTTGGGTACATGGACCCCGAATACTATAGGTTTCAACACTTGACAACTAAGAGTGACGTGTATAGTTTTGGCGTTGTTTTGCTAGAATTGCTATCTGGGAACAAAGCCATCCACAAAAATGAAAATGGGGTGCCAAGAAATCTGGTAGATTTCATGGTACCTTACATTTTTCAAGATGAAATTCACAGGGTTTTAGACCCAAGAATGCCACCTCCAACACCATATGAGATAGAAGCAGTGGCATATGTGGGTTATTTGGCTGGAGATTGTGTGAGATTAGAAGGTAGAGAAAGGCCAACCATGACTGAAATTGTAAATAACTTGGAAAAAGCATTGGCTGCTTGTGGAGCCCAACCGGTGCTATCTCGGTCAACCACAGATTCATCCGCGTAG 2355 0.4221 MAFLFNNTSFCYLFFFFYFLSSFLTINSLSTVSISETSNQTLICALQGQNSNQRAHFLNCTSLPSSVIQIPVNPSTSFSEIVGGNGFLCALRPPSSSSESVMVCWRFYEDDSNVTYKRIYHGPVIENLDSSYSQICGLENGTNRLECWQWPRFNQSMDLRFSSIAVGEDFVCGLLESGRITCTGSSGSVVGNEPKGNYRVIGAASRYACAISIDGRLDCWGNMSGKIPQGRFSSMALGEDRSCAIGLDRKAVCWGWGAESNFSMPQSLRATKFLAIEAKKSVFCGVFYDDFSLHCWGSEIFNPNNKVFDNVLPGPCRNQNQCRCEAIPDSAMYCDQGVICKPCDNETLSVTESPLSPPSPAPLPAPSQNENSGWSKKMVAFLVVGCVGSFCWLLIVAFLLYKYCKVRVCRVHDSGRLDETADSANLPEEPQAQPVPAVLEKRLSHIISMGNGGGHLEEFSLKLLQQVTNNFSEEHKIGTGSFGSVYHATLEDGKEIAIKRAEISSTPQSYAILGGTKRQEDKDNAFVNELEALSRLNHKNLVRLLGFYEDNNERILVYDYMNNGSLNDHLQHHKLPNHDSPLRSWTGRIKVALDAARGIEYLHEYATPPIIHRDIKSANILLDAKFTAKVCDFGLSLMGPEDEESHLSLHAAGTFGYMDPEYYRFQHLTTKSDVYSFGVVLLELLSGNKAIHKNENGVPRNLVDFMVPYIFQDEIHRVLDPRMPPPTPYEIEAVAYVGYLAGDCVRLEGRERPTMTEIVNNLEKALAACGAQPVLSRSTTDSSA 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00015 784 SMART serkin_6 471 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00015 784 FunFam Serine/threonine-protein kinase-like protein CCR4 561 781 - -
Bach13g00015 784 SUPERFAMILY Protein kinase-like (PK-like) 453 762 IPR011009 -
Bach13g00015 784 Gene3D - 157 311 IPR009091 -
Bach13g00015 784 Gene3D Transferase(Phosphotransferase) domain 1 561 773 - -
Bach13g00015 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Bach13g00015 784 ProSitePatterns Protein kinases ATP-binding region signature. 477 499 IPR017441 GO:0005524
Bach13g00015 784 CDD STKc_IRAK 477 764 - -
Bach13g00015 784 SUPERFAMILY RCC1/BLIP-II 116 300 IPR009091 -
Bach13g00015 784 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 41 772 IPR044815 GO:0004674
Bach13g00015 784 Gene3D Phosphorylase Kinase; domain 1 447 560 - -
Bach13g00015 784 Pfam Protein kinase domain 472 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00015 784 ProSiteProfiles Protein kinase domain profile. 471 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00015 Bach-Chr13 962721 965075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00015 28 780 Receptor kinase-like Gene Family AT5G47850 49.805 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Bach13g00015 Pkinase 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00015 - - qsa:O6P43_029962 987.638