Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00011 TGGATAGTGGAAGGTCTGAAAGGTTAATTAAGGGCAGTCATTGGCAACTTGAATTGTTATTATGAATGTGCTTGTTGGATATTGTATGAATACTGTGCAGTACTGTTGATAGATTATACAGGCAACAAGGGAGTGAAGAAGTGTTTGGAATGATTTATTATGGCTCAGCAGTCATCTAGACTTCAGCGCTTGCTCACTCTGCTGGACACTGGGTCTACACAAGCCACAAGGTTGACTGCCGCTAGGCAGATAGGGGACATTGCAAAATCACATCCTCATGAGTTGAACAGTCTTTTAAAGAAGGTTTCTCAATATCTGCGCAGTAAAAATTGGGATACAAGAGTTGCTGCAGCTCATGCGATTGGGGCTATTGCTGAAAATGTTAAGCATTCATCTTTTACTGAACTCTTTGTTTCTGTTCAATCAAAAATGTCTGAGGCTGGAATATCTGGTTGTCATGAAGATCTGTTTCCTTGGCCTTTGTTTGGGTCTAATATTACTGGGAATTCATTCAGAAGCTTTGATATCAACAAGGTGCTTGAATTTGGTGCTTTATTAGCATCTGGAGGACAGGAGTATGACATTGGAAGTGACAATGTAAAGAATCCAAAGGAGAGATTGGCTCGCCAGAAGAAAAATCTTCAACGTCGATTAGGTTTGGATGTATGTGAACAATTTATGGATATCAATGAAATGATAAGAGATGAAGATCTTATGGCACACAAATCAGATTCACGTCTAAATGGGATAGACCAAAGAGTTTTCACTTCTCATTCTGTACATAACATCCAGAAAATGGTTGCAAATATGGTTCCTGTCAAATCAAAATGGCCGAGTGCACGAGAACTGAATCTTTTGAAACGTAAAGCAAAAATAAACTCGAAAGACCAAACAAAAAGCTGGTGTGAGGATGGAAGTACAGAGACATCCTGTGCTCATAATATGACTTCTAAAGGCGCATGTCCTGATTCTGTAAATCGTGATACGGCATTATTGGATGGTAGTCATGATGAAGATGGCTTTGAGCAAGATGGGGATGGACGATGGCCTTTCCACACTTTTGTTGAGCAACTTATCCTTGATATGTTTGATCCTGTTTGGGAGATACGGCATGGTAGTGTTATGGCATTGAGAGAGATTCTAACACATCAAGGTGGTTCTGCGGGAGTGTTTAAACCAGACTATCGCTTGAATAGGGCATTATTTATTGAACCAAAAGATAAAAGTATTTCAAATGCATTGAAGAGAGAAAGGGAGATTGATTTGAATATGCAAGTCTCAGTAGATGAGTTTGACTCAAATTTGAAGAGGCCAAAGCTTGAAGATGTATCATCATTCTCCTCTATGGAAAACACAATTACGTGTAGCAATGATAATGATGTTGAAATCAACATTAGTGCAAATACCTATAGATGCAATTTGCCTTTGGATTGTGGGAATGGTCAGTGCAATGGTATTCCTGTTGACATGGAGCTGGAATCTTGCTCTGAGGGTTTACATTATTTCAGCAAGGAAGCCACTACTATGGAAGAGCAGAAAAGGTTGTCTAATGATGATAAGATCTCCTCGGGAAATCTTAATGTTCTAAAAAGTCATCCTCAGAATTCTGAGTTGTTGAACTTGGTTAAAGTGGCAAGAAGTTCTTGGCTTCAAAACCTTGAATTCCTTCAAGATTGTGTAATACGCTTCTTGTGTGTTTTGTCACTTGACCGCTTTGGAGATTATGTATCTGATCAGGTTGTTGCACCTGTACGTGAAACCTGTGCACAGGCATTAGGTGCTGCTTTTAAGTACATGCATCCAGCATTAATTAATGAAACGTTAAATATATTGCTGAAAATGCAGTGTAGACCAGAATGGGAGATTCGTCATGGCAGTCTCTTAGGTATCAAATATTTGGTTGCTGTACGGCAGGAGATGCTTCCTGACTTGCTTGGACGTGTTCTTCCTGCTTGTAAATCTGGGTTGGAGGATCCAGATGATGATGTCCGAGCAGTTGCTGCTGATGCTTTAATACCCGCTGCAGCTGCAATAGTAGCTTTGCAGGGTCAAACACTGCACTCAATTGTGATGCTACTGTGGGATATATTGCTTGATTTGGATGATTTAAGTCCATCAACTAGCAGTGTAATGAATCTACTGGCTGAAATCTATTCTCAGGAAGAGATGATCCCTATGATGTATAAAGCATTTAAGTCGAGGGACACAGAAGCGGCAGATCTAAATGGAGTTGGTCATGATGGTGGTGGTGAAGAAAATCCTTATATGCTTTCAACGTTGGCCCCACGGTTGTGGCCCTTTATGAGGCATAGTATAACATCCGTCCGACATTCTGCTATACGCACTTTGGAAAGGCTACTTGAAGCTGAATATAAGAGAAACATGTCTGAGCCTTCTAGTACTTCATTTTGGCCTTCTTTTATACTGGGAGACACACTTCGAATTGTCTTTCAGAATCTACTGCTGGAACCAAATGAGAATATTTTGCAGTGTTCCGAAAGAGTTTGGAGGCTTCTTGTTCAGTGCCCGGTGGAGGACTTGGAGACAGCTGCTAGGTCTTACATGACATCTTGGATAGAACTTGCATCGACACCTTTTGGTTCTTCATTAGATGCCTCAAAGATGTTTTGGCCTGCTGCTTTTCCACGAAAAAGCCAATTTAGAGCAGCAGCTAAAATAAGAGCTGTGAAGGTTGAACATGAATTTGGTGGGGATGTACATCTGGATTCTACTAAAGGAAATATTCCACTTGAAAGAAATGGAGACACTGCTATGAATCCAGTTAAGATAGTTATTGGTGCTGACGTGGACACATCAGTAACTAATACTCGAGTGGTTACGGCAACTGCTTTAGGAATTTTTGCTTCTAGGCTACCAGAGAGTTCTATAAAATATGTGATTGATCCATTGTGGAACACACTTACCTCTCTATCTGGGGTCCCGCGTCAGGTTGCATCCTTGGTACTTATTTCTTGGTTCAAAGAGATTAAAAGCAGAGATTTGTCTGAAAATCTTAATGGTATTCCTGGCGTCCCCAATTATCTCAAAAATTGGTTGCTGGACTTATTGGCGTGTTCTGACCCGTCATTCCCAACAAAAGATTCACTTCTTCCTTATGCTGAGCTTTCAAGAACATATTCAAAGATGCGTGGTGAGGCTGCACAATTGGTAAACGCCATCAAGTCTTCTGGAATGTTTGATCAGTTATTGTCGACTTTAAAAACTGAATTAGAGAGCTTAAGTGCGGACGATGCCTTTAGTTTTGCGTCAAAAATTCCTGCCTTGGGTAATGACAGTGCTGGGAACGAATGCTTCGGAAGGAACATTATTGATGATCTTGAGTCATCAAAGCAAAGGCTCTTGGCAACTTCACGCTACTTGAAATGTGTTCAGGGTAACTTGCATGTTACAGTTTCATCTGCTGTTGCTGCTGCAGTTGTCTGGATGTCTGAGTTACCTTTGCGACTTACACCGATCATTTTGCCTTTGATGGCTTCAATCAAACGAGAACAAGAGGAAATATTGCAAATGAAGTCAGCTGAGGCACTCGCTGAGCTTATGTATAACTGTGTTGCACGTAGGCCATGCCCCAATGATAAGTTAATTAAGAATATTTGTGGTTTAACTTGTATGGATCCCTCTGAGACACCTCAAGCTAAATTTATTAGCTCCATTGAGAGCATTGAGGACCAGGGTCTTCTGTCCTTTGGAACTTCTGTGGGCAAACAGAAGTCAAAGGTCCATGTACTGGCTGGTGATGATCGATCCAAGGTGGAGGGCTTTATTAGTAGACGAGGATCTGAACTCTCGTTGAGGCTTTTATGTGACAAGTTTGGAACTTCTTTATTTGATAAGCTTCCTAAGTTATGGGATTGCCTTACAGAGGTGCTGAAGCCCATCTCTTCTGAATCATTGCCTGCCACTGATGAAAGACAAGTCTCCATGGCTATGGAGTCTGGTTGTGATCCCCAGATTTTGATTAACAATATCCAGGTGGTACGATCAATTGCTCCTGCGTTAAATGAGGAGTTGAAGCCAAAACTGTTGACACTTCTCCCATGCATATTCAGATGTGTCGAGCATTCTCACGTAGCAGTTAGATTAGCTGCTTCACGCTGTATCACTTCAATGGCCAGATCAATGACTGCGAAAGTTATGGGAGCCGTGGTTGAGAATGCTATCCCTATGTTGGCAGATGCATCATCAGTTCATGCTCGGCAAGGTGCAGGAATGCTCATTAGTTTTCTTGTTCAGGGACTGGGTGTAGAGCTGGTTCCATATGCTCCTCTGTTGGTCGTCCCACTTCTAAGGTGCATGAGTGATTGTGATCAGTCTGTCAGACAGAGTGTGACCCATAGTTTTGCTGCTCTTGTACCTTTACTTCCTTTAGCACGAGGTCTTCCACCACCTGTTGGATTAGGTGAAGGTTTATCAAGAAATGCAGAAGATGTAAAATTTTTGGAGCAACTGCTTGATAACTCTCATATTGATGATTACAAGTTATGCACTGAACTAAAAGTGACATTGAGAAGGTATCAGCAAGAAGGTATAAATTGGTTGGCTTTCATGAAACGTTTCAAGCTTCATGGAATTTTATGTGATGACATGGGTCTTGGTAAGACACTTCAGGCATCAGCAATTGTGGCATCTGACACTGTTGAACATCGAACTTCAGATGGGAATGGGGATGTGGATGTCCTATCATCTTTAATTGTTTGCCCGTCAACACTTGTTGGGCACTGGGCCTTTGAGATAGAGAAGTATATTGATATTTCTGTCATATCTACTCTTCAATATGTTGGTTCTGCTCAGGAGCGGATGTGTCTTAGAGATCACTTTTGCAAGCACAATGTGATCATAACATCATATGATGTTGTTCGCAAAGATATTGATTATTTGGGACAACTTCTGTGGAATTACTGTATTTTGGATGAAGGGCATATAATCAAGAATGCTAAATCTAAAGTTACAGTTGCTATAAAGCAGTTGAAAGCCCAGCACCGCTTGGTATTGAGTGGAACTCCAATACAGAATAACATCATGGACTTGTGGTCACTTTTTGATTTTCTAATGCCAGGATTTCTTGGTACAGAGAGACAGTTCCAAGCTGCATATGGAAAACCGCTCCTAGCTGCAAAAGATCCAAAGTGCTCTGCTAAGGATGCTGAAGCAGGAGCACTTGCCATGGAGGCATTGCATAAGCAGGTCATGCCTTTCCTCCTTCGTCGAACAAAGGATGAAGTATTGTCTGATCTGCCCGAGAAAATAATTCAGGACAGATACTGTGATCTGAGTCCTGTACAATTTAAACTGTATGAACAGTATTCTGGATCTCGTGCAAAACAAGAAATCTCCTCTTTAGTTACAAAGAACGAGTCTGCTGGAACAGAAGGAAGTAGCAGTTCGCCTAGAACATCTTCACATGCGCTCCAATACTTGCTAAAGTTGTGTAGTCATCCTTTGCTTGTGGTTGGAGAAAAGATTCCAGATTCACTCTCCGTTGTTCTCTCAGAATTGTTTCCTGCTGGCTCTGACTTCATATCAGAGCTTCACAAACTGCATCATTCCCCAAAGTTGGTTGCTCTACAGGAGATTCTGGAGGAGTGTGGAATTGGGGTTGATTCTTCAGGTTCTGAGGAGGATGGTAGCATTGGGCAGCACAGGGTCTTGATATTTGCTCAACACAAGGCTTTTCTGGATATAATTGAAAAAGATTTGTTCCAGACGTATATGAAGAATGTCACATATTTGCGGCTGGATGGATCTGTTGAGCCAGAGAAGCGTTTTGAAATTGTCAAAGCTTTCAATTCAGACCCTACTATTGATGTCCTGCTGCTTACAACACATGTGGGTGGCCTTGGTTTGAACCTGACATCTGCAGATACCCTCGTTTTTGTGGAGCATGACTGGAATCCAATGCGAGATCATCAGGCTATGGATAGAGCACACAGGTTAGGTCAGAAAAAAGTTGTTAATGTCCATCGTCTGATAATGCGTGGTACTTTAGAAGAGAAAGTTATGAGCCTTCAAAAGTTCAAAGTTTCGGTGGCTAATGCTGTCATCAATGCGGAAAATGCCAGTATGACAACAATGAACACAGATCAGTTGCTTGATTTATTTGCATCTGCTGAAACCTCCAAGAAGGGGGCCTCTGTTGCGAAGCGCTCTGAGAACTCTGACGAAGACACTAAATTGGTAGGCAGTGGAAAGGGGTTAAAAGCTGTTCTGGGGGGATTGGAAGAGCTATGGGACCAATCACAATATACAGAAGAATACAATTTGAGTCAATTTTTGGCAAAGCTAAATGGCTAAAATTCAAGGTTTTTTCTTTTCAGAGTGTACATATCCTAGATTAAAAATTTTGACATTGTAGCGTCTCATTTTTTTCTCCCATGCCCTCGTTCATTTTTTGCCCTCATTTCTCAAACACCCTAGTGCTGGCATTGTCCACGTGTCCATGCAAGTATGACAATGTATGTTTTACACGATATTGAAGAAAGGGAGTGGGTTTAGTTACTGGTGAAAGCCATTAGGGGTGGAATGTAAAAAGATGTACTAGTGATGACTTCGAGAGGGGATGGAGTAATATTATAATTTTAATTTTGTATATATGTGATTAGCCCTAATTATAATTCTA 6637 0.4127 MAQQSSRLQRLLTLLDTGSTQATRLTAARQIGDIAKSHPHELNSLLKKVSQYLRSKNWDTRVAAAHAIGAIAENVKHSSFTELFVSVQSKMSEAGISGCHEDLFPWPLFGSNITGNSFRSFDINKVLEFGALLASGGQEYDIGSDNVKNPKERLARQKKNLQRRLGLDVCEQFMDINEMIRDEDLMAHKSDSRLNGIDQRVFTSHSVHNIQKMVANMVPVKSKWPSARELNLLKRKAKINSKDQTKSWCEDGSTETSCAHNMTSKGACPDSVNRDTALLDGSHDEDGFEQDGDGRWPFHTFVEQLILDMFDPVWEIRHGSVMALREILTHQGGSAGVFKPDYRLNRALFIEPKDKSISNALKREREIDLNMQVSVDEFDSNLKRPKLEDVSSFSSMENTITCSNDNDVEINISANTYRCNLPLDCGNGQCNGIPVDMELESCSEGLHYFSKEATTMEEQKRLSNDDKISSGNLNVLKSHPQNSELLNLVKVARSSWLQNLEFLQDCVIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAAFKYMHPALINETLNILLKMQCRPEWEIRHGSLLGIKYLVAVRQEMLPDLLGRVLPACKSGLEDPDDDVRAVAADALIPAAAAIVALQGQTLHSIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQEEMIPMMYKAFKSRDTEAADLNGVGHDGGGEENPYMLSTLAPRLWPFMRHSITSVRHSAIRTLERLLEAEYKRNMSEPSSTSFWPSFILGDTLRIVFQNLLLEPNENILQCSERVWRLLVQCPVEDLETAARSYMTSWIELASTPFGSSLDASKMFWPAAFPRKSQFRAAAKIRAVKVEHEFGGDVHLDSTKGNIPLERNGDTAMNPVKIVIGADVDTSVTNTRVVTATALGIFASRLPESSIKYVIDPLWNTLTSLSGVPRQVASLVLISWFKEIKSRDLSENLNGIPGVPNYLKNWLLDLLACSDPSFPTKDSLLPYAELSRTYSKMRGEAAQLVNAIKSSGMFDQLLSTLKTELESLSADDAFSFASKIPALGNDSAGNECFGRNIIDDLESSKQRLLATSRYLKCVQGNLHVTVSSAVAAAVVWMSELPLRLTPIILPLMASIKREQEEILQMKSAEALAELMYNCVARRPCPNDKLIKNICGLTCMDPSETPQAKFISSIESIEDQGLLSFGTSVGKQKSKVHVLAGDDRSKVEGFISRRGSELSLRLLCDKFGTSLFDKLPKLWDCLTEVLKPISSESLPATDERQVSMAMESGCDPQILINNIQVVRSIAPALNEELKPKLLTLLPCIFRCVEHSHVAVRLAASRCITSMARSMTAKVMGAVVENAIPMLADASSVHARQGAGMLISFLVQGLGVELVPYAPLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPPPVGLGEGLSRNAEDVKFLEQLLDNSHIDDYKLCTELKVTLRRYQQEGINWLAFMKRFKLHGILCDDMGLGKTLQASAIVASDTVEHRTSDGNGDVDVLSSLIVCPSTLVGHWAFEIEKYIDISVISTLQYVGSAQERMCLRDHFCKHNVIITSYDVVRKDIDYLGQLLWNYCILDEGHIIKNAKSKVTVAIKQLKAQHRLVLSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQAAYGKPLLAAKDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQFKLYEQYSGSRAKQEISSLVTKNESAGTEGSSSSPRTSSHALQYLLKLCSHPLLVVGEKIPDSLSVVLSELFPAGSDFISELHKLHHSPKLVALQEILEECGIGVDSSGSEEDGSIGQHRVLIFAQHKAFLDIIEKDLFQTYMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQKFKVSVANAVINAENASMTTMNTDQLLDLFASAETSKKGASVAKRSENSDEDTKLVGSGKGLKAVLGGLEELWDQSQYTEEYNLSQFLAKLNG 2050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00011 2050 Pfam Domain of unknown function (DUF3535) 782 1239 IPR022707 -
Bach13g00011 2050 Gene3D - 504 688 IPR011989 -
Bach13g00011 2050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1442 1690 IPR027417 -
Bach13g00011 2050 SMART helicmild6 1847 1933 IPR001650 -
Bach13g00011 2050 Gene3D - 1700 2014 IPR027417 -
Bach13g00011 2050 Pfam Helicase conserved C-terminal domain 1833 1933 IPR001650 -
Bach13g00011 2050 FunFam TATA-binding protein-associated factor 1700 2015 - -
Bach13g00011 2050 MobiDBLite consensus disorder prediction 250 270 - -
Bach13g00011 2050 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1468 1640 IPR014001 -
Bach13g00011 2050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1691 1989 IPR027417 -
Bach13g00011 2050 FunFam B-TFIID TATA-box-binding protein-associated factor 1 1426 1689 - -
Bach13g00011 2050 PANTHER TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 4 2049 IPR044972 GO:0003677|GO:0016887|GO:0017025
Bach13g00011 2050 Gene3D - 1103 1412 IPR011989 -
Bach13g00011 2050 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1819 1981 IPR001650 -
Bach13g00011 2050 CDD SF2_C_SNF 1802 1944 - -
Bach13g00011 2050 Pfam SNF2-related domain 1474 1767 IPR000330 GO:0005524|GO:0140658
Bach13g00011 2050 MobiDBLite consensus disorder prediction 1733 1752 - -
Bach13g00011 2050 CDD DEXHc_Mot1 1456 1690 IPR044078 GO:0005524
Bach13g00011 2050 Gene3D - 1428 1689 IPR038718 -
Bach13g00011 2050 FunFam TATA-binding protein-associated factor BTAF1 1 96 - -
Bach13g00011 2050 SMART ultradead3 1452 1650 IPR014001 -
Bach13g00011 2050 MobiDBLite consensus disorder prediction 246 271 - -
Bach13g00011 2050 SUPERFAMILY ARM repeat 6 1498 IPR016024 -
Bach13g00011 2050 FunFam TATA-binding protein-associated factor BTAF1 507 687 - -
Bach13g00011 2050 FunFam TATA-binding protein-associated factor BTAF1 1203 1414 - -
Bach13g00011 2050 Gene3D - 4 86 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00011 Bach-Chr13 772046 795031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00011 1830 1974 RAD5 or RAD16-like Gene Family AT1G11100 32.192 7.30e-19 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach13g00011 DUF3535 2.3e-100 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00011 K15192 - gmx:100777977 3214.09