Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00006 ATGGGAGCAGAACTAAGAGAGTTGATGGAGGACATGGAAGAAGAAGTACAAGCTGAGGTCAATATATGGAAATACATATTCGGGTTTGTGGAAATGGCAGTTGTGAAATGTGCTATTGATCTTAAAATACCAGATGCCATTGAAAGCCATGGAAGCTCTATGACACTGTCCCAGTTATCGTCAACTCTAGGGTGTGATCCTACTTTTCTGTTCCGCATCATGAGGTTCCTAATCCACCGCAAGATTTTCAAAGAAGTACCCACCAACCATGGCTCTCCAAGCTATGCTCAAACCCCACTTTCAAGCCGTTTAATGAGAAATGGAGATCAAAGCAGGGCTGCTTTTGTTCTTCTAGAGAGCAGTCCAGTGATGCTAGCATCTTGGCTTAGCCTCTCTGCTCGTGTTTTATCTAATGGCACTTTCCCATTTGAGAAAGCTCATGGTGGGGATGTTTGGAGCTATGCAGAAGATAATCTTGATTACAGTCATCTAGTCAATGAAGCAATGGCTTGTGATGCTAGGTTGGCTGTGCCAGCAATAATTGAAGGCTGTGCTGAGGTATTTGATGGTATTGGTACTGTGGTGGATGTTGGTGGGGGAAATGGCACAGCCATGTGTATGTTGATTAAAGCTCTCCCTTGGATTCAAGCCATTAACTTCGATCTTCCCCATGTTGTCTCTGCAGCCTCAAAGTGTGATCGTGTGGAGCATGTGGGAGGTGACATGTTTTTGTGTGTTCCAAAAGCTGATGCTGCCTTTCTTATGTGGGTTTTGCATGACTGGGGAGATGAAGAGTGCATCAAAATCTTAAGGAAATGTAGAGAAGCTATACCAAAGGAAAATGGAAGGGTTATAATAGTTGAGGCTATTATTGAAGAGGGAAATGAGGACAAGTTAAAGGATGCCAAGTTGAGGATAGACATGGCAATGATGGCTCACACTAACACTGGCAAAGAGAGGACAGTGAAGGAATGGGAATACTTAATCAGAGAAGCTGGATTTAGCAGATACACTGTCAAATCCATTCATGCTGTGAAATCTGTGATTATGGCTTTTCCATGA 1062 0.4322 MGAELRELMEDMEEEVQAEVNIWKYIFGFVEMAVVKCAIDLKIPDAIESHGSSMTLSQLSSTLGCDPTFLFRIMRFLIHRKIFKEVPTNHGSPSYAQTPLSSRLMRNGDQSRAAFVLLESSPVMLASWLSLSARVLSNGTFPFEKAHGGDVWSYAEDNLDYSHLVNEAMACDARLAVPAIIEGCAEVFDGIGTVVDVGGGNGTAMCMLIKALPWIQAINFDLPHVVSAASKCDRVEHVGGDMFLCVPKADAAFLMWVLHDWGDEECIKILRKCREAIPKENGRVIIVEAIIEEGNEDKLKDAKLRIDMAMMAHTNTGKERTVKEWEYLIREAGFSRYTVKSIHAVKSVIMAFP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00006 353 CDD AdoMet_MTases 193 287 - -
Bach13g00006 353 Gene3D Vaccinia Virus protein VP39 106 353 IPR029063 -
Bach13g00006 353 PIRSF O-mtase 2 353 IPR016461 GO:0008168
Bach13g00006 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 345 IPR029063 -
Bach13g00006 353 FunFam O-methyltransferase family protein 6 104 - -
Bach13g00006 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 353 IPR016461 GO:0008168
Bach13g00006 353 FunFam O-methyltransferase family protein 106 352 - -
Bach13g00006 353 Pfam Dimerisation domain 34 77 IPR012967 GO:0046983
Bach13g00006 353 Gene3D - 6 104 IPR036388 -
Bach13g00006 353 SUPERFAMILY "Winged helix" DNA-binding domain 12 108 IPR036390 -
Bach13g00006 353 PANTHER O-METHYLTRANSFERASE 32 336 IPR016461 GO:0008168
Bach13g00006 353 Pfam O-methyltransferase domain 128 335 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00006 Bach-Chr13 637280 638959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00006 35 339 Monolignol Biosynthesis Gene Families AT5G54160 34.603 2.17e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00006 K22588 - cave:132167621 471.085