Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g02096 ATGACGTCATCACCGGTGTTATCGTCGTCGTCAGCCTCTTCGGTGGCAGTGGCTTCTGCTTTAGTCTCCATCGAGCGTTCATTTTCCAAGCTCTGGGCCTCGCCGGAGGACTTCCACACCTTTGACAACCCACGCCGATTCTTTGGCTTCGCCAATCGACTTCAGCTTGTCATCAACCAACTACTCTTGTCCAAGCAATCGCCGCCGGAGAACCTCCCGGTTTCTGTGCAAACCGCCCTGAAAGGAATTGCCGGTGATCTCTCTAAAGCAGCTGAAATTGTTTCCATCTATGAAAAGAGTAGCAAGATATTTGTCTTGATCAATTGCAAGTCTCTGTGTGCATCCCTTCAAGAGCACACTGTATCCATTGGAGGATGGCTCGCCTTGCTCGATTATGCTCTTCAAGGCAACCCTGACCTCCGCAAAAAGGCTTCTGATCTCTGCAGAGACATGAAACTTGCTCAATTCAGAGTTACAGAGAACGAAGAGAGAGTACAACGTACCCTAGAGAAAGAAGGACAAAGAAGACAAACAAGCAAAGCTGTAAAGAGTGCTATTGTAATGGATTTGGCTCGTGCTTTGGGGATTGACCCAGATAATCATTCTGAGTTATCTAACCAAGTAAAGCTCTTTAAGAACGATCTCTTGCGCTCAAATTCCGTATCAGAGCGGCGGATTCTAGTTTCTTTTGAAAGAATTTTGGAGTATTGGTCAAATGAGCCTAATATAGTGACTAGGAATTTGAAAATAGACATTGAAGAAGATGCCCCTATTTCTCCATTCAAAAACTTCCTCTGCCCACTGACCAAAGAAGTGATGAAGGATCCTGTGGTGCTGGAATCGTCTCAGACCTATGAAAGGACTGCAATTGAATACTGGTTTGAACGGTGTATTGAAGATGGCCGTGACCCAACTTGTCCTGTCACTGGGAGGGTTCTCAAGTCCTTGGATTTGAAACCCAATATTGGTTTGGCTGGGGCAATTGAAGAGTGGGTTAACAGGATTGTTGAGTATCAAGTCAAATCTGCACAGAAGCATCTGGCTGAAGAACCACTTTCTGTTGATCGAGTGGAGCAGGCACTGGATAACATTTATAAGGTCTCAGAAGAGCAACCCACTAGCAGATACATAATAAGGAATGAGGGAATTGTGCTGTTGATTGTCAAGATGCTTAGTAATAGCTCAAAATCTATAGGAAGTCGTTTGAGAAGCAAAGCACTAATGACTTTAGTTAATGTGGCCAAGGATGAAGAAAGCAGGAAAATAATGCTTGAAGGGGGTATCACTAGATTGGCTGTACATAGTCTTATTGGGAGCTCAGAGAAAGAGAGAGAATATGCTGTCAAGCTGTTACTAGAGTTCTCCAGTGATGAAGCTTGTTGCATACGGATAGCATTAGAGAAAGGTGCATTAGTTCTTCTCTCCAGTATGGCTGGAAATCTGGAGTATCCTGTGTTGTCCAATGTCGCTGAGGAAGTCTTGAGACAAATAGAGACGGTTGATGATAATGTTCAACGTTTAGCAGCAGCTGGTAGATTTGAACCTTTACTTTCACGTTTACGTGATGGTTCTGATGGAGTAAAGGTAGAGATGGCTTCCTTGTTGGGAAGGATGACCTTGACAAATAGCAGCAAAGAACAAATTGCTAGGCAAAGTGCTAGACTACTTGTTGAACTGCTGTCAAGGCCTGAAGGAAAGGCACCAAGTTTGCAAGCATTATATAACTTGTCTGGATTGGATGACAATGCAACTATCCTTGTTGATTCTGCAGCCCTACCATCTCTAACAGAGGTGCTTTTTATTGACCAGGATCCATTAAATGAGTTAAAGAAATTAGCTGCTTCGATAGTTGCAAATATAGTATCCAAGCCGGGGCACTGGGAACTAGCATCTGCTGACAAGAAGGGGAACACAATGCAGTCAGAGAATATAGTTTTTGGGCTTTTGGGGCTTTTAAACTCTGCATCTTCTGAATGTCAAGTTTCAGTTCTTCGCATTCTTTGTGGAATTACATCTTCGCCCCAGGCCTCAGAGTTGGTAGCCTCTCATATCAAGTCTGCGGATGGCTTTAAAGCAGTCATATCATTTCTTGAACACCCAGAAGTTGAACACAGGATATATGCTTATAAGCTTGCAAGACTGCTATCTGAATGGTTCAGTCAAGATTTAGTGAATGTGCTGAGACTTTCCCACAAGCTTTTTATGCTGAAAGAAAAACTGTTAGATCACCAATCTACTGATGAAGAGAGATCAGATGCAGCACGAATACTGTCCAACATGGTCCTTTCAGGAGATGAAGACGAGACACTTTTAGGAAGTGATTTCATGGGTTGGACTGTAACTACTCTCAAAAACCAGTGGCGTAGCTCCAATGCAAGGAATTCACGAACTGCTTCAGGCATGCTGGAGGGTCTTCTTGGTCTCCTACTTCGCTTCACTAGGAACCTTGACCAGCATAATCATAATGCAGTTAGAGAGAACCATCTCATGACTGTTTTCTGTGAGCAGCTAGATTTTACCTCCACGCCAAAGGTGAAAGAACTTGCTGCCCTTGGATTGCGAAACTTATCAGAATTTGGAAGGTCAATTATTCCTAGAGAGTCCGAACCACCACCACCCAGTGGGTTTTGCGCTTCAATAGTATTCATTTGTGGAAGGCGCTCTACTCAACCTTCCACTTGTCCCATCCACAACAGTTTGTGTGTGGAAGATAGTCAATTGTGCCTGCTCAAGTGCAATTGTATCAAGCCCCTCGTTGATCTTCTCAATGACAATAATACCAGTGTCCAGGTTGCTGCAGTGGAGGCACTTTCTACTCTGGTGTTGGATTACACATCTAACAGTTTCAAGAGAACAATTGAGGAACTAGAACAATTAGGTGTTGTTGAATCTGTGATCACACTTTTCACAGAGACTAGATCTGCTGAGCTCCAAGATAAGACAATTTGGATGGTAGAGAAAATGCTGAGAGTGGAAAGTCACAACAGTCGGCACTCGCTGAATCAATCTCTTGTGAGGGGCTTGGTTGAAGCCTTTAAGCATGGGAATACCAACACCAGGAAGCATGCTCAGGATGCTCTCACACACCTAAAACAGTTATCAGGTGTTAGTGCAAAGACATCAAGTCAAACTCAGGCTCGTAGATAG 3147 0.4376 MTSSPVLSSSSASSVAVASALVSIERSFSKLWASPEDFHTFDNPRRFFGFANRLQLVINQLLLSKQSPPENLPVSVQTALKGIAGDLSKAAEIVSIYEKSSKIFVLINCKSLCASLQEHTVSIGGWLALLDYALQGNPDLRKKASDLCRDMKLAQFRVTENEERVQRTLEKEGQRRQTSKAVKSAIVMDLARALGIDPDNHSELSNQVKLFKNDLLRSNSVSERRILVSFERILEYWSNEPNIVTRNLKIDIEEDAPISPFKNFLCPLTKEVMKDPVVLESSQTYERTAIEYWFERCIEDGRDPTCPVTGRVLKSLDLKPNIGLAGAIEEWVNRIVEYQVKSAQKHLAEEPLSVDRVEQALDNIYKVSEEQPTSRYIIRNEGIVLLIVKMLSNSSKSIGSRLRSKALMTLVNVAKDEESRKIMLEGGITRLAVHSLIGSSEKEREYAVKLLLEFSSDEACCIRIALEKGALVLLSSMAGNLEYPVLSNVAEEVLRQIETVDDNVQRLAAAGRFEPLLSRLRDGSDGVKVEMASLLGRMTLTNSSKEQIARQSARLLVELLSRPEGKAPSLQALYNLSGLDDNATILVDSAALPSLTEVLFIDQDPLNELKKLAASIVANIVSKPGHWELASADKKGNTMQSENIVFGLLGLLNSASSECQVSVLRILCGITSSPQASELVASHIKSADGFKAVISFLEHPEVEHRIYAYKLARLLSEWFSQDLVNVLRLSHKLFMLKEKLLDHQSTDEERSDAARILSNMVLSGDEDETLLGSDFMGWTVTTLKNQWRSSNARNSRTASGMLEGLLGLLLRFTRNLDQHNHNAVRENHLMTVFCEQLDFTSTPKVKELAALGLRNLSEFGRSIIPRESEPPPPSGFCASIVFICGRRSTQPSTCPIHNSLCVEDSQLCLLKCNCIKPLVDLLNDNNTSVQVAAVEALSTLVLDYTSNSFKRTIEELEQLGVVESVITLFTETRSAELQDKTIWMVEKMLRVESHNSRHSLNQSLVRGLVEAFKHGNTNTRKHAQDALTHLKQLSGVSAKTSSQTQARR 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g02096 1048 SMART arm_5 817 858 IPR000225 GO:0005515
Bach12g02096 1048 SMART arm_5 541 578 IPR000225 GO:0005515
Bach12g02096 1048 SMART arm_5 579 622 IPR000225 GO:0005515
Bach12g02096 1048 SMART arm_5 371 415 IPR000225 GO:0005515
Bach12g02096 1048 SMART arm_5 416 456 IPR000225 GO:0005515
Bach12g02096 1048 SMART arm_5 901 942 IPR000225 GO:0005515
Bach12g02096 1048 SMART arm_5 499 540 IPR000225 GO:0005515
Bach12g02096 1048 SMART arm_5 949 990 IPR000225 GO:0005515
Bach12g02096 1048 Gene3D - 348 858 IPR011989 -
Bach12g02096 1048 Pfam U-box domain 263 333 IPR003613 GO:0004842|GO:0016567
Bach12g02096 1048 Coils Coil 490 510 - -
Bach12g02096 1048 Pfam Armadillo/beta-catenin-like repeat 908 940 IPR000225 GO:0005515
Bach12g02096 1048 SUPERFAMILY RING/U-box 254 334 - -
Bach12g02096 1048 ProSiteProfiles U-box domain profile. 259 338 IPR003613 GO:0004842|GO:0016567
Bach12g02096 1048 SMART Ubox_2 263 331 IPR003613 GO:0004842|GO:0016567
Bach12g02096 1048 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 347 IPR013083 -
Bach12g02096 1048 Gene3D - 875 1045 IPR011989 -
Bach12g02096 1048 CDD RING-Ubox_PUB 264 318 IPR045210 -
Bach12g02096 1048 SUPERFAMILY ARM repeat 354 674 IPR016024 -
Bach12g02096 1048 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 19 1038 - -
Bach12g02096 1048 SUPERFAMILY ARM repeat 647 1033 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g02096 Bach-Chr12 20488479 20493445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g02096 261 1038 U-box Gene Family AT1G20780 30.961 1.36e-94 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g02096 - - pcin:129304037 1445.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g02096 12 20488479 20493445 Bach12g02096 12 20488479 20493445 ECH