Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g02092 ATGCGGCAATCTCAGAAGCATTCTCCAATGGCGGATGAAATGCAACGTAATTTTGGGAGGAGGAAGCGCAAGAGAGGGCCTGGAAATGGGAAAAGGAAGCTTCTTGTCAATGAGAAAGTGGAGGTAAGGAGTGTGGAAGATGGCTTTCTGGGCTCTTGGCACCCGGGAACGGTTATCCAAAGTGGAAACCTGAAACGTCATGTCAGATATGACAATATTCTAACTGACGATGAATTAGATTATCTCATTGAAGTGGTGGGTGTTTCTCCTGTTTTGGATGGTAATTCTTCATCAACTTTTAATGGACGTGGGATCATTAGACCACTGCCTCCTTTGATGGAGTTTGGAAGGTGTCATCTTCAATATGGTCTTTGTGTCGATGTGTACTATCAGGAAGCTTGGTGGGAAGGTGTTATTTTTGATCATCATGATGGTATGGAGGAGAGGAGGATATTTTTCCCAGATATAGGTGATGAAATGAAAATTTGCATTGACCAATTGCGTATTACTCAGGACTGGGATGAAGTTACAGAAAACTGGGAGCGGCGTGGGAACTGGCTATTTCTTGAAGTTCTTGAGGAGTGTGAACAGGCATCCTATGTCGCAGTTTCACTGAAGCAAATTTGGTATGACGTGCGGGCAAAAAAGGATTTTGATAAGATCAGGGACTGGACTTTTAAGGTGAAGAGCTTGTGGAGAGATTTGGTGATGGAAGTGATTGGTCACTATTTCGCTATTACACTGAAAGAACTTATCCCAGCCTTGGAAATTTCAAGGGATTTATTGGAAAAAGCACTGGGACCAGAGTCAGTTGAACCTACTGCTGATGTTCATCATGATGCTAGTCCTAATAATTTATCTGCTTCTGATATTCGAAATGCTGCCAGTCCAAAGGAAATGGATGAATTTCTACCTTTTCTGGATATTGTTCCGCAAAAACCCATCCAAAGGAGACATGATCTTTATCCCCTAGATGGATTACCAAATTTTCATCTTGAGATAAGGTTAAATTTTTCCTCCTCTGATAAAGAAGTCTTGCCGCAGGATGAATCTGTGCCTCCCGTTGAAGAAATGTTACCTCAGGATCTGGAAAAACCTTCCTGCAATAATTCTGGTGTAGTTTCTGTTTCTACATGTTATGGGAAAAGCAGAAAATTTAAACGGTGTATGAGCTCCGTATACTGGGAACTAATACTGCCTGGAGCGGAATTTTGCCCTAATGCTATTAATGAGTATCTTGTTGCGAGTGAAAGGAAAACTAAGGAACTTCTGAAGACAAAAGTTCGTAAACATCTTTCATTTCTGGGATGGAAAATTGAATTTAGAGATATTAAAACCCTTTACAACCAACGGCAATACAAGTACACGTCTCCTAATGATGAGAAGTCTTACATGTCTCTTAATCAAGTTTGTAAACATTTGAAAAAGGAAGCCAGCATGAACTTGCCACCTCCTTCTGTTAATGTTGATGCTAATCCTAAACTGCTCACTAGAAATGGCAAGCAAAAACAGAAATGCTTGAGGGTAGAGGAAAAAGAATTACCTGGTCGGATGTTAAGATCGACCAAAAGGGTGCAGAAGGCAGATGCTACTAGTCTGTCACACCAAAAGCCTTTAAGTGTACTCTCCTGGTTGATCGACAACAACAAGGTGTTGCCAAGAGCAAAGGTCTACTATCATGCAAGATGCAGCCCTCATTCTAAGGGTGAGGGTCGAATAACTCGTGAGGGCATTAAATGTAACTGTTGTCTTAACGTATTTAGTCTTGGTGGCTTTGAAGGTCATGCTCGGGGCACTATTAGCCACAGACCTGCTGTTAACATCTTTTTGAAAGATGATATGTCACTTTTAGAAGTCCAGATGCAATTAATGCGAGATTATCAGAAAAAGGAAAGTCTAGCAAAGGCATATAGTGATTGGCATGAAGGCAATAATGATGAAATTTGTTCTGTTTGTCACTATGGTGGTAAACTAATCTTATGTGATCAATGCCCTTCTTCATTCCACAAGGGTTGCCTTGGATTAGAGAACATCCCTGATGGTGACTGGTTTTGCCCATCATGTCAATGTGGGATTTGTGGTCAAGGTAAAATTGAAGGGGCTGACAGTGCAAATTTTCTTACTTGTAGTCAATGTGAACATAAATATCATATTCGGTGCCTGAGAAATGAAGGGGTAGACAAGTCAAGAATATATGGGAAAAAATGGTTTTGCAGCAAAAGCTGTGAAAAGATATATGCTGGCCTCCACAAACTAGTGGGAAAACCAGTTGTTGTGGCTGTGGGTAAGGATAATCTAAAATGGACATTGATGAAGTGGTTCAACTCTGACAGTTGTCAACTTGGTAGAGATAATTACTTATTGACTGAGAGTTACTGCAAACTCAATGTTGCTCTTGGGTTAATGCATGAATGTTTTGAGACGCTAAAGGAACCCACATCTAAAAGAGATCTCGTAGAAGATGTTCTTTTCAGCAGATGGAACAAGCTTAAGCGATTAAACTTCCAAGGCTTTTATACTGTACTTCTGGAGAAAGATGATGAATTGATTAGCGCAGCCACTTTAAGGGTCTATGGGGAGAAGGTGGCTGAAGTGCCTCTTGTTGGTACAAGAGTTCAGTATCGTCGACGTGGAATGTGTCGGGTTTTAATGAATGAGCTTGAAAAGATGCTCAAACAACTCGGAGTGGAGAGGCTGGTTTTGCCTTCTGCTCGTGTTACGCTGGATACATGGACCAAGAACTTCGGCTTTACAAAGATGACAAATTCAGACAGAAAACAGTTTCTGGACTATACCTTCCTTGATTTTCAGGGGGCTGTCATGTGCCAGAAACTGTTGATGCCTCCTCAAGATTCAGTTCTTTCAAGAGAGACCAAGCGTTTATCTGTAAGCAGAAATATTGATCTTGATGGATCAAGTTCTCCAGAAGAAGTAGATCAGGCAGAAGACATCAGAGTGCACCGGACACTGGATCCACAACTATTGGAGTATGTCTCACCTCTGCCGTCTTTCTAA 3015 0.4126 MRQSQKHSPMADEMQRNFGRRKRKRGPGNGKRKLLVNEKVEVRSVEDGFLGSWHPGTVIQSGNLKRHVRYDNILTDDELDYLIEVVGVSPVLDGNSSSTFNGRGIIRPLPPLMEFGRCHLQYGLCVDVYYQEAWWEGVIFDHHDGMEERRIFFPDIGDEMKICIDQLRITQDWDEVTENWERRGNWLFLEVLEECEQASYVAVSLKQIWYDVRAKKDFDKIRDWTFKVKSLWRDLVMEVIGHYFAITLKELIPALEISRDLLEKALGPESVEPTADVHHDASPNNLSASDIRNAASPKEMDEFLPFLDIVPQKPIQRRHDLYPLDGLPNFHLEIRLNFSSSDKEVLPQDESVPPVEEMLPQDLEKPSCNNSGVVSVSTCYGKSRKFKRCMSSVYWELILPGAEFCPNAINEYLVASERKTKELLKTKVRKHLSFLGWKIEFRDIKTLYNQRQYKYTSPNDEKSYMSLNQVCKHLKKEASMNLPPPSVNVDANPKLLTRNGKQKQKCLRVEEKELPGRMLRSTKRVQKADATSLSHQKPLSVLSWLIDNNKVLPRAKVYYHARCSPHSKGEGRITREGIKCNCCLNVFSLGGFEGHARGTISHRPAVNIFLKDDMSLLEVQMQLMRDYQKKESLAKAYSDWHEGNNDEICSVCHYGGKLILCDQCPSSFHKGCLGLENIPDGDWFCPSCQCGICGQGKIEGADSANFLTCSQCEHKYHIRCLRNEGVDKSRIYGKKWFCSKSCEKIYAGLHKLVGKPVVVAVGKDNLKWTLMKWFNSDSCQLGRDNYLLTESYCKLNVALGLMHECFETLKEPTSKRDLVEDVLFSRWNKLKRLNFQGFYTVLLEKDDELISAATLRVYGEKVAEVPLVGTRVQYRRRGMCRVLMNELEKMLKQLGVERLVLPSARVTLDTWTKNFGFTKMTNSDRKQFLDYTFLDFQGAVMCQKLLMPPQDSVLSRETKRLSVSRNIDLDGSSSPEEVDQAEDIRVHRTLDPQLLEYVSPLPSF 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g02092 1004 SUPERFAMILY FYVE/PHD zinc finger 637 693 IPR011011 -
Bach12g02092 1004 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 783 946 IPR000182 GO:0016747
Bach12g02092 1004 PANTHER PHD FINGER PROTEIN 12 416 977 IPR042163 GO:0003714|GO:0045892
Bach12g02092 1004 CDD Tudor_Agenet_AtDUF_rpt1_3 36 111 - -
Bach12g02092 1004 Pfam Acetyltransferase (GNAT) family 821 917 IPR000182 GO:0016747
Bach12g02092 1004 Pfam Agenet domain 38 111 IPR008395 -
Bach12g02092 1004 CDD PHD_SF 690 740 - -
Bach12g02092 1004 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 640 689 IPR013083 -
Bach12g02092 1004 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 690 745 IPR013083 -
Bach12g02092 1004 Pfam PHD-finger 648 690 IPR019787 -
Bach12g02092 1004 SUPERFAMILY FYVE/PHD zinc finger 690 749 IPR011011 -
Bach12g02092 1004 MobiDBLite consensus disorder prediction 1 19 - -
Bach12g02092 1004 Pfam Tify domain binding domain 571 623 IPR032308 -
Bach12g02092 1004 Gene3D - 802 932 - -
Bach12g02092 1004 MobiDBLite consensus disorder prediction 1 33 - -
Bach12g02092 1004 ProSiteProfiles Zinc finger PHD-type profile. 646 691 IPR019787 -
Bach12g02092 1004 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 825 924 IPR016181 -
Bach12g02092 1004 SMART PHD_3 690 742 IPR001965 -
Bach12g02092 1004 SMART PHD_3 648 689 IPR001965 -
Bach12g02092 1004 CDD NAT_SF 841 901 - -
Bach12g02092 1004 SMART ring_2 649 688 IPR001841 -
Bach12g02092 1004 SMART ring_2 690 742 IPR001841 -
Bach12g02092 1004 SMART agenet_At_2 32 96 IPR014002 -
Bach12g02092 1004 SMART agenet_At_2 118 175 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g02092 Bach-Chr12 20364294 20370986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g02092 517 894 PHD Transcription Factor Family AT5G58610 50.904 4.36e-118 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach12g02092 Acetyltransf_1 7.8e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g02092 - - aprc:113857662 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g02092 12 20364294 20370986 Bach12g02092 12 20364294 20370986 ECH