Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g02088 ATGTCTGTCTCCGTTGCGGTTTCTAACTCTCCTGTGTTCTCTCCATCATCTTTGTTCTACAGCAAAAGCTCGATGATCTCTTCTTCCTCCGAAGCTCTAACCTTGTCGTTGGCTCATCTGAAGCCAACGTCTACGGCTTCGGCTACATCGCCTTCTTCTCCGGTGTCGCCTTTCAGGCTTCGTTTCCCCAAGCCCCCAACTGGGCTTTCCAATTCGGCGTCGTCGTCGACCTCGCCGACCAGCACGGTATTGAAGAGGAAGAGGCCGATGAGGCTTGATATACCTGTTAGTTCTCTAACTTTTGGGGCTCCGGCGACGCCGTCATCGCGGTCAAGGGATGTTGTGGAAGATGAGGGGCTGGGGTTTTCCGTGTACTGTAAGAGAGGAAGGAGAGAGTTCATGGAGGACCGTTATTCGGCTGCTGTTAATCTTCAAGGAAAACCCAAACAGGCTTTCTTTGGCATATTTGATGGACATGGAGGTGCAAAAGCTGCTGAATTTGCCGCAGACAACTTAGAAAAGAATATCATGGATGAAATTGTCAGGAGAGATGAGAGTGAGGTTGAGGAGGCAGTGAAGTACGGTTACCTGACCACAGATTCTGATTTCTTGAAAGAGGATCTCCATGGTGGCTCTTGCTGTGTAACAGCATTGATAAGGAATGGTAACCTTGTTGTCTCTAATGCTGGTGATTGCCGTGCAGTCATTAGCAGAGCCGGTGTTGCAGAAGCCCTCACATCTGATCACCGGCCTTCAAGGGAAGATGAAAGGGACAGAATTGAGACCCTGGGTGGCTATGTTGACATATGTCATGGTGTTTGGAGAATCCAGGGATCTCTGGCTATATCTAGAGGAATTGGAGATACGCATCTCAAGCAATGGGTGACAGCAGAGCCTGAAACTAAAGTTCTTAGCATCGAAGCGGATCATGAGTTGTTAATATTAGCTTCAGATGGATTGTGGGACAAGGTTAGTAATCAAGAAGCAGTTGATATCGCTCGTCCCTTGTGCTTGGACAGCAACAGACCCCAATCAATGGCGGCCTGTAAAAAGCTTGCAGAGCTGTCAGCGTCGCGTGGCTCTCTTGATGATATTAGTGTTATGATAATAAAATTGGAGCACTATGTTTGAAGTTGAGTAGAAATTTTACCAACTATATGCTACAAGGAACTTGGTTTTCTACCTGGCTATAATAGAAGTTAAAAAGAAGCTGCTGTCCTGATAATAGCGTAGCTGTATTCTTTTTGTATATATACACCTGACCACATTATTTTTGTGGGGATAGATTTAACATGATAACTTGATTCTTTTTACATACAGCAAATTTGATGTAATAAGCATTTAATTATTCTTTATACATTAATTTTTACTTAAAC 1376 0.4462 MSVSVAVSNSPVFSPSSLFYSKSSMISSSSEALTLSLAHLKPTSTASATSPSSPVSPFRLRFPKPPTGLSNSASSSTSPTSTVLKRKRPMRLDIPVSSLTFGAPATPSSRSRDVVEDEGLGFSVYCKRGRREFMEDRYSAAVNLQGKPKQAFFGIFDGHGGAKAAEFAADNLEKNIMDEIVRRDESEVEEAVKYGYLTTDSDFLKEDLHGGSCCVTALIRNGNLVVSNAGDCRAVISRAGVAEALTSDHRPSREDERDRIETLGGYVDICHGVWRIQGSLAISRGIGDTHLKQWVTAEPETKVLSIEADHELLILASDGLWDKVSNQEAVDIARPLCLDSNRPQSMAACKKLAELSASRGSLDDISVMIIKLEHYV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g02088 376 ProSitePatterns PPM-type phosphatase domain signature. 152 160 IPR000222 GO:0043169
Bach12g02088 376 SMART PP2C_SIG_2 129 372 IPR001932 -
Bach12g02088 376 MobiDBLite consensus disorder prediction 44 87 - -
Bach12g02088 376 Pfam Protein phosphatase 2C 122 364 IPR001932 -
Bach12g02088 376 PANTHER PROTEIN PHOSPHATASE 2C 83 371 IPR015655 GO:0004722|GO:0006470
Bach12g02088 376 MobiDBLite consensus disorder prediction 67 84 - -
Bach12g02088 376 FunFam probable protein phosphatase 2C 25 114 375 - -
Bach12g02088 376 SMART PP2C_4 111 370 IPR001932 -
Bach12g02088 376 SUPERFAMILY PP2C-like 120 373 IPR036457 -
Bach12g02088 376 ProSiteProfiles PPM-type phosphatase domain profile. 121 372 IPR001932 -
Bach12g02088 376 CDD PP2Cc 121 372 IPR001932 -
Bach12g02088 376 Gene3D - 111 375 IPR036457 -
Bach12g02088 376 Coils Coil 169 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g02088 Bach-Chr12 20277355 20279370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g02088 1 376 PP2C-type Phosphatase Gene Family AT2G30020 64.484 3.45e-174 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g02088 K17506 - qsa:O6P43_014067 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g02088 12 20277355 20279370 Bach12g02088 12 20277355 20279370 ECH