Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g02087 ATGGCTTCTTGGGTGAGAGGGAAGTGTATCGGTAAGGGCGCGTTTGGTAGTGTTTGTATTGGAGTTTCCAAATCGGACGGTCGAGTGTTTGCGGTGAAGTCCGTGGATCGTCAGACCGGGCTTCCTGGTCAGTTGGAGGCGTTAGAGAATGAAATTCGAATTCTCCGGGAGTTGTCGGCGTCGCCTTACGTGGTGGGTTATCTCGGCGACGATGTCGCGTACGAGGTGGGTGGCATGACGTCATACCGGAACCTGCACTTGGAGTACTTGCCAGATGGCACCGTTGCTGACCTGGCGTCTCGAAATAGCGGGAAGGATGCTGACGTGGAAGAGCAGTTAATAAGATACTACACTTGGTGCCTTGTGCACGCGCTGCGATACGTACACTCTAAAGGCATCGTCCACTGCGACGTTAAAGGGAGGAACGTTCTGGTGGGGCGCAATGGCGGTGTTGCGAAACTCGCTGATTTCGGTTCCGCGGTGAGATTTGGCGGTGGCGTCGGTGGAGATCAGATGCTGCCACGTGGCAGCCCGCTCTGGATGGCCCCGGAGGTGATTCGCGGGGAATCTCAGGGCCCCGAATCCGACGTCTGGTCCTTGGGCTGCACAGTGATCGAGATGGTCACCGGTAAACCGGCATGGGAGGACCGCGGTGTTGACTCGCTAAATCTAATTGGGTACTCCGGCGACATTCCCGAATTCCCGAGTCAATTGTCGGAACTCGGCCACGATTTTCTGGGAAAGTGTCTGGGGAGAGAACCGAGTCAGCGGTGGAGCTGTGAACAGCTGGTGCAGCACCCATTTTTATGCTCTACTCCTCCCAATGAGCTCGTTGAACCGTCTCCACGGTGTGTTCTCGATTGGGTTAACCCAGAATTCTCCGACGAAGATGAAGAAGAAGAAATTGGAGCAAATACCGTACAATCAGCCAAGGATCGAATTGGTAAATTAGCTACCAGCGTAAGAGTACTAGATTGGGAATCAGATGATTGGGTGGCGGTGAGGACAGTGGCAACCGACACAGAACCAACAACAACAGAAACGGGTGCTGGTCCAGCTGGTAGCAGTGGGAACGAAGGGGAGGGGATAAACTGGGAATATCCAAATTTTATGAGGGTAGAAGGGGAAGGAGAAGTGGGGACAAGTTGCGAAGAATTGGATTCAACCATAACAGAAAAAAAAGAAAGTGCAAATCCGGAAACACGAAATTTTGGTGGCAGGAGTTCAATGGTGCGGCGGTCCTGCACTAGATCTGGGCTTCGCTGTCGGTATAGGTCGCAAAAGTTGGATTCAGAATTAGTGGTGAAAAATAGAAAGACAAGAATATGCATTTCCAGCTTGCCTTATGATGCTCTTCTTGTTAGGTGA 1368 0.5219 MASWVRGKCIGKGAFGSVCIGVSKSDGRVFAVKSVDRQTGLPGQLEALENEIRILRELSASPYVVGYLGDDVAYEVGGMTSYRNLHLEYLPDGTVADLASRNSGKDADVEEQLIRYYTWCLVHALRYVHSKGIVHCDVKGRNVLVGRNGGVAKLADFGSAVRFGGGVGGDQMLPRGSPLWMAPEVIRGESQGPESDVWSLGCTVIEMVTGKPAWEDRGVDSLNLIGYSGDIPEFPSQLSELGHDFLGKCLGREPSQRWSCEQLVQHPFLCSTPPNELVEPSPRCVLDWVNPEFSDEDEEEEIGANTVQSAKDRIGKLATSVRVLDWESDDWVAVRTVATDTEPTTTETGAGPAGSSGNEGEGINWEYPNFMRVEGEGEVGTSCEELDSTITEKKESANPETRNFGGRSSMVRRSCTRSGLRCRYRSQKLDSELVVKNRKTRICISSLPYDALLVR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g02087 455 Pfam Protein kinase domain 6 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g02087 455 FunFam Serine threonine protein kinase putative 2 318 - -
Bach12g02087 455 CDD STKc_MAPKKK 3 269 - -
Bach12g02087 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Bach12g02087 455 MobiDBLite consensus disorder prediction 338 362 - -
Bach12g02087 455 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Bach12g02087 455 ProSiteProfiles Protein kinase domain profile. 4 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g02087 455 MobiDBLite consensus disorder prediction 338 353 - -
Bach12g02087 455 SUPERFAMILY Protein kinase-like (PK-like) 4 295 IPR011009 -
Bach12g02087 455 MobiDBLite consensus disorder prediction 390 409 - -
Bach12g02087 455 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 345 - -
Bach12g02087 455 SMART serkin_6 4 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g02087 455 Gene3D Transferase(Phosphotransferase) domain 1 2 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g02087 Bach-Chr12 20244521 20246150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g02087 4 369 MAP Kinase Kinase Kinase AT1G07150 57.221 6.06e-129 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bach12g02087 Pkinase 1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g02087 - - qsa:O6P43_014068 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g02087 12 20244521 20246150 Bach12g02087 12 20244521 20246150 ECH