Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g02081 ATGGTTAGCCAATCTGAGTCACCCAACAAGCCCATGACTGAATTGGACCAAATGGTTCGGAGTATATTCCCAGACAATAGCAATGTCATGCTTGCAGCCATTATTTCTCTGCTTCTGGTTATTCTCTTTGTGCTTCTTCTCCATGTCTATGCTAAATGGTTCTTGGCTCAGGCAGAAGCACAAGCACGAATTCGCCGCCGCCGTCGGCTGAGAACGGTGACCGTGTCCGACGTACTGGGTCCTGCCCGGTTCCATCACTTCCAGAACTTCACCATTGAAGATTCGCCCTTTTCGAGTTCCCCGACCAAAGGGCTGGATTCTGCAATCATTGCTGCGATTCCCATTTTCATATACGAAGAAACAGAGGAAGGAGAGAAGCGGAGCAGGGATGAGCAGGAGCAGGAGCAGGAATTGGAGTGTGTTATTTGCTTGAGTTCTTTTGAAGATGGTGAAATTGGGAGGAGTTTACCCAAATGTGGGCATTGTTTTCATGTGGAGTGCATTGACATGTGGCTGGGTTCACATTCCAGTTGCCCAACTTGCAGAGCACCAATTATGTGTGGGATTGTTGAGAGTGATTCTCAATTGGGTTCTGTCAATGGAGATGATTCTTCTTCTGTGGTTGAGATTGTGATTGATTCTTCTCCAAGCTCTGAGGTAAGTGAGAATGAGAATGGAAATGATACCAATGTGAGTGTTTCTGTTTCTATATCAGAAACTTCATCCTCTTTGCTGGGGATGGATTGCACTTTGAAGAGGGTTCTAAGCAAAGTTTTCCAATCTTCTAATGCTAATGAGTTAGATGCTTGA 810 0.4543 MVSQSESPNKPMTELDQMVRSIFPDNSNVMLAAIISLLLVILFVLLLHVYAKWFLAQAEAQARIRRRRRLRTVTVSDVLGPARFHHFQNFTIEDSPFSSSPTKGLDSAIIAAIPIFIYEETEEGEKRSRDEQEQEQELECVICLSSFEDGEIGRSLPKCGHCFHVECIDMWLGSHSSCPTCRAPIMCGIVESDSQLGSVNGDDSSSVVEIVIDSSPSSEVSENENGNDTNVSVSVSISETSSSLLGMDCTLKRVLSKVFQSSNANELDA 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g02081 269 FunFam RING-H2 finger protein ATL1 92 187 - -
Bach12g02081 269 Pfam Ring finger domain 139 182 IPR001841 -
Bach12g02081 269 CDD RING-H2_EL5-like 140 182 - -
Bach12g02081 269 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Bach12g02081 269 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 15 194 - -
Bach12g02081 269 SMART ring_2 140 181 IPR001841 -
Bach12g02081 269 SUPERFAMILY RING/U-box 128 186 - -
Bach12g02081 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 187 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g02081 Bach-Chr12 20103024 20103833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g02081 26 216 Rapid Response to Elicitors AT3G16720 34.715 3.98e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g02081 - - vvo:131624082 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g02081 12 20103024 20103833 Bach12g02081 12 20103024 20103833 ECH