Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g02080 ATGGAGTCCGCCACCATGGCCTCTCCGGCGCTGGTACCGGCGTGTCAGTGGGTTGGAGTTGTTGACTACACGTATAACATGCATAAGCAATTATCAGTGTCAACAAAGAGTTTAGAAGGTTTTGACAGCAGTGAGTGCTGCATATGTTTGAGTGTTTTCCAAGAAGATGAGAAGCTGAAGGTGTTGCCAGAATGTGGGCATGCCTATCATTCTGAGTGCTTGGACAAGTGGCTAAGTGCAAACCCTAGTTGCCCTCTATGTAGGGCTTCCTTGATCCAACTAAATTCCCTGGAAAATCTGCCATTTCCAATTCATCATGATGGTGCAATGGATCACTAA 339 0.4631 MESATMASPALVPACQWVGVVDYTYNMHKQLSVSTKSLEGFDSSECCICLSVFQEDEKLKVLPECGHAYHSECLDKWLSANPSCPLCRASLIQLNSLENLPFPIHHDGAMDH 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g02080 112 Pfam Ring finger domain 45 88 IPR001841 -
Bach12g02080 112 ProSiteProfiles Zinc finger RING-type profile. 46 88 IPR001841 -
Bach12g02080 112 SMART ring_2 46 87 IPR001841 -
Bach12g02080 112 SMART FANCL_C_2 42 95 - -
Bach12g02080 112 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 32 92 IPR044675 -
Bach12g02080 112 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 93 IPR013083 -
Bach12g02080 112 SUPERFAMILY RING/U-box 24 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g02080 Bach-Chr12 20075667 20076005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g02080 26 96 C3H Transcription Factor Family AT5G17600 46.575 2.87e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g02080 - - lja:Lj0g3v0098519.1 98.5969