Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g02044 ATGGCCACAGAAGCAACGGCTAAATTCCAAAACCCTGACTTTCGCCCTGTTCCGCAGCCACCAGATTTCCATCCAGAAGTGATGGTGGCTGCCCACGACGGCCTCCATTTCTGGGAGTTCATGATCGCCGGCTCCGTGGCAGGCTGCATTGAACACATGGCCATGTTCCCCGTCGACACCGTGAAGACCCACATGCAAGCTCTCGGATCATGCCCGATTAAGTCGGTTAGCGTTCGACAAGCCCTTCAATCCATTATGAAATCTGAGGGTCCTTCTGCTCTGTACCGTGGTATTGGCGCCATGGGTCTCGGTGCTGGACCTGCACATGCGGTGTATTTTTCGGTTTATGAGTATTGTAAGAAATATTTCTCTCACGGGAATCCTAATAATTCTGTGGCACATGCCATTTCGGGTGTGTGCGCTACTATTTCTAGTGATGCTGTGTTTACACCTATGGATATGGTTAAGCAAAGGTTGCAATTGAGTAATAGTGGTTATAAGGGTGTTTGGGATTGTGTAAAGAGGGTGTTGAGTGAGGAGGGAATAGGGGCATTTTATGCATCGTATAGGACTACGGTTTTGATGAATGCACCATTTACAGCAGTGCATTTTTCTACATATGAGGCTACTAAAAAGGGTCTAATGGGGATTTCGCCTGACAGTGCTGATGATGAACGTTTGGTTGTTCATGCAACAGCTGGAGCTGCTGCTGGGGCTTTGGCTGCTGTCGTCACAACGCCATTGGATGTGGTTAAAACCCAATTACAGTGTCAGGGTGTCTGCGGCTGCGATAGATTTAAAAGTGGTTCAATTAGTGATGTTCTAAAAACAATTGTGGAGAAGGATGGATACAAGGGGCTCGTGAGGGGATGGATTCCAAGGATGCTTTTCCACGCTCCTGCTGCTGCAATTTGTTGGTCTACATATGAAGCTGGAAAGAGCTTTTTCCAAGAATTAAATCACAAAGGGATGGTCTGA 978 0.4734 MATEATAKFQNPDFRPVPQPPDFHPEVMVAAHDGLHFWEFMIAGSVAGCIEHMAMFPVDTVKTHMQALGSCPIKSVSVRQALQSIMKSEGPSALYRGIGAMGLGAGPAHAVYFSVYEYCKKYFSHGNPNNSVAHAISGVCATISSDAVFTPMDMVKQRLQLSNSGYKGVWDCVKRVLSEEGIGAFYASYRTTVLMNAPFTAVHFSTYEATKKGLMGISPDSADDERLVVHATAGAAAGALAAVVTTPLDVVKTQLQCQGVCGCDRFKSGSISDVLKTIVEKDGYKGLVRGWIPRMLFHAPAAAICWSTYEAGKSFFQELNHKGMV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g02044 325 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Bach12g02044 325 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Bach12g02044 325 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Bach12g02044 325 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Bach12g02044 325 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Bach12g02044 325 PANTHER MITOFERRIN-1-RELATED 28 318 - -
Bach12g02044 325 FunFam Mitochondrial RNA-splicing protein MRS3 164 325 - -
Bach12g02044 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Bach12g02044 325 Gene3D Mitochondrial carrier domain 164 324 IPR023395 -
Bach12g02044 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
Bach12g02044 325 Pfam Mitochondrial carrier protein 35 125 IPR018108 -
Bach12g02044 325 Pfam Mitochondrial carrier protein 226 318 IPR018108 -
Bach12g02044 325 Pfam Mitochondrial carrier protein 130 215 IPR018108 -
Bach12g02044 325 SUPERFAMILY Mitochondrial carrier 33 310 IPR023395 -
Bach12g02044 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Bach12g02044 325 Gene3D Mitochondrial carrier domain 20 163 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g02044 Bach-Chr12 19179893 19185167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g02044 1 320 Chloroplast and Mitochondria Gene Families AT2G30160 75.692 3.74e-180 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g02044 K15113 - qsa:O6P43_014101 578.941